CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004129
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cytochrome b-245 light chain 
Protein Synonyms/Alias
 Cytochrome b(558) alpha chain; Cytochrome b558 subunit alpha; Neutrophil cytochrome b 22 kDa polypeptide; Superoxide-generating NADPH oxidase light chain subunit; p22 phagocyte B-cytochrome; p22-phox; p22phox 
Gene Name
 CYBA 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
60EYPRGKRKKGSTMERubiquitination[1]
61YPRGKRKKGSTMERWubiquitination[1]
71TMERWGQKYMTAVVKubiquitination[1, 2]
78KYMTAVVKLFGPFTRubiquitination[1]
137QWTPIEPKPRERPQIubiquitination[1, 2]
149PQIGGTIKQPPSNPPubiquitination[1, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
 Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. 
Sequence Annotation
 METAL 94 94 Iron (heme axial ligand) (Potential).
 MOD_RES 147 147 Phosphothreonine (By similarity).  
Keyword
 3D-structure; Cell membrane; Chronic granulomatous disease; Complete proteome; Direct protein sequencing; Disease mutation; Electron transport; Heme; Iron; Membrane; Metal-binding; NADP; Oxidoreductase; Phosphoprotein; Polymorphism; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 195 AA 
Protein Sequence
MGQIEWAMWA NEQALASGLI LITGGIVATA GRFTQWYFGA YSIVAGVFVC LLEYPRGKRK 60
KGSTMERWGQ KYMTAVVKLF GPFTRNYYVR AVLHLLLSVP AGFLLATILG TACLAIASGI 120
YLLAAVRGEQ WTPIEPKPRE RPQIGGTIKQ PPSNPPPRPP AEARKKPSEE EAAVAAGGPP 180
GGPQVNPIPV TDEVV 195 
Gene Ontology
 GO:0016324; C:apical plasma membrane; IEA:Compara.
 GO:0030425; C:dendrite; IEA:Compara.
 GO:0005794; C:Golgi apparatus; IEA:Compara.
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0043020; C:NADPH oxidase complex; IDA:BHF-UCL.
 GO:0043025; C:neuronal cell body; IEA:Compara.
 GO:0030670; C:phagocytic vesicle membrane; TAS:Reactome.
 GO:0030141; C:secretory granule; TAS:BHF-UCL.
 GO:0009055; F:electron carrier activity; TAS:UniProtKB.
 GO:0020037; F:heme binding; IEA:InterPro.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
 GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.
 GO:0071230; P:cellular response to amino acid stimulus; IEA:Compara.
 GO:0071480; P:cellular response to gamma radiation; IEA:Compara.
 GO:0071333; P:cellular response to glucose stimulus; IEA:Compara.
 GO:0071260; P:cellular response to mechanical stimulus; IEA:Compara.
 GO:0071407; P:cellular response to organic cyclic compound; IEA:Compara.
 GO:0071356; P:cellular response to tumor necrosis factor; IEA:Compara.
 GO:0017004; P:cytochrome complex assembly; IDA:BHF-UCL.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0050665; P:hydrogen peroxide biosynthetic process; ISS:BHF-UCL.
 GO:0006954; P:inflammatory response; IMP:BHF-UCL.
 GO:0045087; P:innate immune response; IMP:BHF-UCL.
 GO:0051701; P:interaction with host; TAS:Reactome.
 GO:0003106; P:negative regulation of glomerular filtration by angiotensin; IEA:Compara.
 GO:0055114; P:oxidation-reduction process; IMP:BHF-UCL.
 GO:0090382; P:phagosome maturation; TAS:Reactome.
 GO:0030307; P:positive regulation of cell growth; IEA:Compara.
 GO:0001938; P:positive regulation of endothelial cell proliferation; IEA:Compara.
 GO:0045730; P:respiratory burst; IMP:BHF-UCL.
 GO:0042493; P:response to drug; IEA:Compara.
 GO:0070555; P:response to interleukin-1; IEA:Compara.
 GO:0031667; P:response to nutrient levels; IEA:Compara.
 GO:0014895; P:smooth muscle hypertrophy; ISS:BHF-UCL.
 GO:0042554; P:superoxide anion generation; IMP:BHF-UCL. 
Interpro
 IPR007732; Cyt_b558_asu. 
Pfam
 PF05038; Cytochrom_B558a 
SMART
  
PROSITE
  
PRINTS