CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016728
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 NAD kinase 2, mitochondrial 
Protein Synonyms/Alias
 Mitochondrial NAD kinase; NAD kinase domain-containing protein 1, mitochondrial 
Gene Name
 Nadk2 
Gene Synonyms/Alias
 Mnadk; Nadkd1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
64SRVVVVAKTTRYEFEacetylation[1, 2, 3, 4]
64SRVVVVAKTTRYEFEsuccinylation[4]
86ELSEEDLKQLLALKGacetylation[3]
86ELSEEDLKQLLALKGubiquitination[5]
92LKQLLALKGSSYSGLubiquitination[5]
108ERHHIHTKNVEHIIDacetylation[3]
312VDDGPWEKQKSSGLNacetylation[4, 6]
312VDDGPWEKQKSSGLNsuccinylation[4]
314DGPWEKQKSSGLNLCacetylation[4, 6]
314DGPWEKQKSSGLNLCsuccinylation[4]
314DGPWEKQKSSGLNLCubiquitination[5]
327LCTGTGSKAWSFNINacetylation[3, 4]
327LCTGTGSKAWSFNINsuccinylation[4]
360NLTLPLNKDLVEKVTacetylation[6, 7]
365LNKDLVEKVTNEYNEacetylation[6]
407RQRCFSSKVCVRSRCacetylation[1, 3, 6, 7]
Reference
 [1] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [2] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [3] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [4] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [5] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [6] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [7] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123
Functional Description
 Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor (By similarity). 
Sequence Annotation
 MOD_RES 176 176 Phosphoserine.  
Keyword
 Alternative splicing; ATP-binding; Complete proteome; Kinase; Mitochondrion; NAD; NADP; Nucleotide-binding; Phosphoprotein; Reference proteome; Transferase; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 452 AA 
Protein Sequence
MTCYRGFLLG SCRRVAGGRA ALRGSGSGAD GRRHLGHGQP RELAGGGSPA DGGFRPSRVV 60
VVAKTTRYEF EQQRYRYAEL SEEDLKQLLA LKGSSYSGLL ERHHIHTKNV EHIIDSLRDE 120
GIEVRLVKRR EYDEETVRWA DAVIAAGGDG TMLLAASKVL DRLKPVIGVN TDPERSEGHL 180
CLPVRYTHSF PEALRRFSRG EFRWLWRQRI RLYLEGTGIN PTPVDLHEQQ LSLNQHSRAF 240
NIERAHDERS EASGPQLLPV RALNEVFIGE SLSSRMPYCW AVAVDNLRRD IPNLKGLASY 300
YEISVDDGPW EKQKSSGLNL CTGTGSKAWS FNINRVAAQA VEDVLHIARR QGNLTLPLNK 360
DLVEKVTNEY NESLLYSPEE PKILFSIREP IANRVFSSSR QRCFSSKVCV RSRCWDACMV 420
VDGGTSFEFN DGAIASMMIN KEDELRTVIL EQ 452 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003951; F:NAD+ kinase activity; ISS:UniProtKB.
 GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.
 GO:0019674; P:NAD metabolic process; ISS:UniProtKB.
 GO:0006741; P:NADP biosynthetic process; IEA:InterPro. 
Interpro
 IPR012355; ATP-NAD-like_euk.
 IPR017438; ATP-NAD_kinase_dom_1.
 IPR016064; ATP-NAD_kinase_PpnK-typ.
 IPR017437; ATP-NAD_kinase_PpnK-typ_all-b.
 IPR002504; PolyP/ATP_NADK_prd. 
Pfam
 PF01513; NAD_kinase 
SMART
  
PROSITE
  
PRINTS