CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-032200
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cytoplasmic dynein 1 intermediate chain 2 
Protein Synonyms/Alias
 cDNA, FLJ79018, highly similar to Cytoplasmic dynein 1 intermediate chain 2 
Gene Name
 DYNC1I2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
55QEESDLEKKRREAEAacetylation[1]
129GSRRGPIKLGMAKITubiquitination[2]
247SGRDLEDKEGEIQAGubiquitination[3]
422ELVHKQSKAVAVTSMubiquitination[2]
Reference
 [1] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 630 AA 
Protein Sequence
MSDKSELKAE LERKKQRLAQ IREEKKRKEE ERKKKETDQK KEAVAPVQEE SDLEKKRREA 60
EALLQSMGLT PESPIAEQPL RVVTADTCLF HYLVPPPMSP SSKSVSTPSE AGSQDSGDGA 120
VGSRRGPIKL GMAKITQVDF PPREIVTYTK ETQTPVMAQP KEDEEEDDDV VAPKPPIEPE 180
EEKTLKKDEE NDSKAPPHEL TEEEKQQILH SEEFLSFFDH STRIVERALS EQINIFFDYS 240
GRDLEDKEGE IQAGAKLSLN RQFFDERWSK HRVVSCLDWS SQYPELLVAS YNNNEDAPHE 300
PDGVALVWNM KYKKTTPEYV FHCQSAVMSA TFAKFHPNLV VGGTYSGQIV LWDNRSNKRT 360
PVQRTPLSAA AHTHPVYCVN VVGTQNAHNL ISISTDGKIC SWSLDMLSHP QDSMELVHKQ 420
SKAVAVTSMS FPVGDVNNFV VGSEEGSVYT ACRHGSKAGI SEMFEGHQGP ITGIHCHAAV 480
GAVDFSHLFV TSSFDWTVKL WTTKNNKPLY SFEDNADYVY DVMWSPTHPA LFACVDGMGR 540
LDLWNLNNDT EVPTASISVE GNPALNRVRW THSGREIAVG DSEGQIVIYD VGEQIAVPRN 600
DEWARFGRTL AEINANRADA EEEAATRIPA 630 
Gene Ontology
 GO:0005868; C:cytoplasmic dynein complex; IEA:InterPro.
 GO:0007018; P:microtubule-based movement; IEA:InterPro. 
Interpro
 IPR025956; Dynein_IC_1/2.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF11540; Dynein_IC2
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS50294; WD_REPEATS_REGION 
PRINTS