CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001071
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 UDP-glucose 6-dehydrogenase 
Protein Synonyms/Alias
 UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH 
Gene Name
 Ugdh 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
67VVESCRGKNLFFSTNubiquitination[1]
94ISVNTPTKTYGMGKGubiquitination[1]
107KGRAADLKYIEACARubiquitination[1]
124VQNSNGYKIVTEKSTubiquitination[1]
149RIFDANTKPNLNLQVubiquitination[1]
173GTAIKDLKNPDRVLIacetylation[2]
190DETPEGQKAVRALCAubiquitination[1]
205VYEHWVPKEKILTTNubiquitination[1]
207EHWVPKEKILTTNTWubiquitination[1]
329LFNTVTDKKIAILGFubiquitination[1]
355SSSIYISKYLMDEGAubiquitination[1]
370HLHIYDPKVPREQIVubiquitination[1]
434RIHKKMLKPAFIFDGubiquitination[1]
464FQIETIGKKVSSKRIubiquitination[1]
480YTPGEIPKFSLQDPPubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123
Functional Description
 Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. 
Sequence Annotation
 NP_BIND 11 16 NAD (By similarity).
 NP_BIND 89 93 NAD (By similarity).
 NP_BIND 130 131 NAD (By similarity).
 NP_BIND 276 279 NAD (By similarity).
 REGION 161 165 Substrate binding (By similarity).
 REGION 220 227 Substrate binding (By similarity).
 REGION 260 273 Substrate binding (By similarity).
 REGION 338 339 Substrate binding (By similarity).
 ACT_SITE 276 276 Nucleophile (By similarity).
 BINDING 36 36 NAD (By similarity).
 BINDING 41 41 NAD (By similarity).
 BINDING 165 165 NAD (By similarity).
 BINDING 346 346 NAD (By similarity).
 BINDING 442 442 Substrate (By similarity).
 MOD_RES 107 107 N6-acetyllysine (By similarity).
 MOD_RES 473 473 Phosphotyrosine.
 MOD_RES 474 474 Phosphothreonine.  
Keyword
 Acetylation; Allosteric enzyme; Complete proteome; NAD; Oxidoreductase; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 493 AA 
Protein Sequence
MVEIKKICCI GAGYVGGPTC SVIAHMCPEI RVTVVDVNEA RINAWNSPTL PIYEPGLKEV 60
VESCRGKNLF FSTNIDDAIR EADLVFISVN TPTKTYGMGK GRAADLKYIE ACARRIVQNS 120
NGYKIVTEKS TVPVRAAESI RRIFDANTKP NLNLQVLSNP EFLAEGTAIK DLKNPDRVLI 180
GGDETPEGQK AVRALCAVYE HWVPKEKILT TNTWSSELSK LAANAFLAQR ISSINSISAL 240
CEATGADVEE VATAIGMDQR IGNKFLKASV GFGGSCFQKD VLNLVYLCEA LNLPEVARYW 300
QQVIDMNDYQ RRRFASRIID SLFNTVTDKK IAILGFAFKK DTGDTRESSS IYISKYLMDE 360
GAHLHIYDPK VPREQIVVDL SHPGVSADDQ VSRLVTISKD PYEACDGAHA LVICTEWDMF 420
KELDYERIHK KMLKPAFIFD GRRVLDGLHS ELQTIGFQIE TIGKKVSSKR IPYTPGEIPK 480
FSLQDPPNKK PKV 493 
Gene Ontology
 GO:0051287; F:NAD binding; IEA:InterPro.
 GO:0003979; F:UDP-glucose 6-dehydrogenase activity; IEA:EC.
 GO:0001702; P:gastrulation with mouth forming second; IMP:MGI.
 GO:0006065; P:UDP-glucuronate biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR008927; 6-PGluconate_DH_C-like.
 IPR016040; NAD(P)-bd_dom.
 IPR017476; Nucleotide_sugar_DH.
 IPR014027; UDP-Glc/GDP-Man_DH_C.
 IPR014026; UDP-Glc/GDP-Man_DH_dimer.
 IPR001732; UDP-Glc/GDP-Man_DH_N. 
Pfam
 PF00984; UDPG_MGDP_dh
 PF03720; UDPG_MGDP_dh_C
 PF03721; UDPG_MGDP_dh_N 
SMART
 SM00984; UDPG_MGDP_dh_C 
PROSITE
  
PRINTS