CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039336
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA topoisomerase 2 
Protein Synonyms/Alias
  
Gene Name
 Top2a 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
1278KQTTLPFKPIKKGKKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity). 
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; DNA-binding; Isomerase; Nucleotide-binding; Reference proteome; Topoisomerase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1525 AA 
Protein Sequence
VSPAQPVNEN MLLNKKKNED GKKRLSVERI YQKKTQLEHI LLRPDTYIGS VELVTQQMWV 60
YDEDVGINYR EVTFVPGLYK IFDEILVNAA DNKQRDPKMS CIRVTIGENN LISIWNNGKG 120
IPVVEHKVEK MYVPALIFGQ LLTSSNYDDD EKKVTGGRNG YGAKLCNIFS TKFTVETASR 180
EYKKMFKQTW MDNMGRAGDM ELKPFSGEDY TCITFQPDLS KFKMQSLDKD IVALMVRRAY 240
DIAGSTKDVK VFLNGNRLPV KGFRSYVDMY LKDKVDETGN ALKVVHEQVN PRWEVCLTMS 300
EKGFQQISFV NSIATSKGGR HVDYVADQIV SKLVDVVKKK NKGGVAVKAH QVKNHMWIFV 360
NALIENPTFD SQTKENMTLQ AKSFGSTCQL SEKFIKAAIG CGIVESILNW VKFKAQIQLN 420
KKCSAVKHNR IKGIPKLDDA NDAGSRNSAE CTLILTEGDS AKTLAVSGLG VVGRDKYGVF 480
PLRGKILNVR EASHKQIMEN AEINNIIKIV GLQYKKNYED EDSLKTLRYG KIMIMTDQDQ 540
DGSHIKGLLI NFIHHNWPSL LRHRFLEEFI TPIVKVSKNK QEIAFYSLPE FEEWKSANPN 600
HKKWKVKYYK GLGTSTSKEA KEYFANMKRH RIQFKYSGPE DDAAISLAFS KKQVDDRKEW 660
LTNFMEDRRQ RKLLGLPEDY LYGQTTMYLT YNDFINKELI LFSNSDNERS IPSMVDGLKP 720
GQRKVLFTCF KRNDKREVKV AQLAGSVAEM SSYHHGEMSL MMTIINLAQN FVGSNNLNLL 780
QPIGQFGTRL HGGKDSASPR YIFTMLSPLA RLLFPSKDDH TLRFLYDDNQ RVEPEWYIPI 840
IPMVLINGAE GIGTGWSCKI PNFDVREVVN NIRRLLDGEE PLPMLPSYKN YKGTIEELAS 900
NQYVINGEVA ILNSTTIEIT ELPIRTWTQT YKEQVLEPML NGTEKTPPLI TDYREYHTDT 960
TVKFVIKMTE EKLAEAERVG LHKVFKLQTS LTCNSMVLFD HVGCLKKYDT VLDILRDFFE 1020
LRLKYYGLRK EWLLGMLGAE SSKLNNQARF ILEKIDGKIV IENKPKKELI KVLIQRGYDS 1080
DPVKAWKEAQ QKVPEEEENE ENEESESESS SPAAESGPTF NYLLDMPLWY LTKEKKDELC 1140
KQRDEKEQEL NTLKKKTPSD LWKEDLAAFV EELEVVEAKE KQDEQVGLPG KGVKAKGKKA 1200
QISEVLPSPV GKRVIPQVTM EMRAEAEKKI RRKIKSENVE GTPAEDGAEP GGLRQRLEKR 1260
QKREPGTRAK KQTTLPFKPI KKGKKKNPWS DSESDMSSNE SNFDVPPREK EPRIAATKAK 1320
FTADLDSDDD FSGLDEKDED EDFFPLDDTP PKTKMPPKNT KKALKPQKSS TSVDLESDGK 1380
DSVPASPGAS AADVPAETEP SKPSSKQTVG VKRTITKGQS LTSTAGTKKR AVPKETKSDS 1440
ALNAHVSKKP APAKAKNSRK RKPSSSDSSD SEFEKAISKG ATSKKPKGEE RDFHVDLDDT 1500
VAPRAKSGRA RKPIKYLEES DDDLF 1525 
Gene Ontology
 GO:0005694; C:chromosome; IEA:InterPro.
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003918; F:DNA topoisomerase type II (ATP-hydrolyzing) activity; IEA:EC.
 GO:0006265; P:DNA topological change; IEA:InterPro. 
Interpro
 IPR024946; Arg_repress_C-like.
 IPR012542; DTHCT.
 IPR003594; HATPase_ATP-bd.
 IPR020568; Ribosomal_S5_D2-typ_fold.
 IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
 IPR001241; Topo_IIA.
 IPR002205; Topo_IIA_A/C.
 IPR013758; Topo_IIA_A/C_ab.
 IPR013757; Topo_IIA_A_a.
 IPR013506; Topo_IIA_bsu_dom2.
 IPR013759; Topo_IIA_cen_dom.
 IPR013760; Topo_IIA_like_dom.
 IPR018522; TopoIIA_CS.
 IPR006171; Toprim_domain. 
Pfam
 PF00204; DNA_gyraseB
 PF00521; DNA_topoisoIV
 PF08070; DTHCT
 PF02518; HATPase_c
 PF01751; Toprim 
SMART
 SM00387; HATPase_c
 SM00433; TOP2c
 SM00434; TOP4c 
PROSITE
 PS00177; TOPOISOMERASE_II 
PRINTS
 PR00418; TPI2FAMILY.