CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012340
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Desmocollin-3 
Protein Synonyms/Alias
 Cadherin family member 3; Desmocollin-4; HT-CP 
Gene Name
 DSC3 
Gene Synonyms/Alias
 CDHF3; DSC4 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
180ISGRGVDKEPLNLFYubiquitination[1]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
 Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. May contribute to epidermal cell positioning (stratification) by mediating differential adhesiveness between cells that express different isoforms. 
Sequence Annotation
 DOMAIN 136 243 Cadherin 1.
 DOMAIN 244 355 Cadherin 2.
 DOMAIN 356 471 Cadherin 3.
 DOMAIN 472 579 Cadherin 4.
 DOMAIN 580 690 Cadherin 5.
 MOD_RES 859 859 Phosphoserine (By similarity).
 MOD_RES 863 863 Phosphoserine (By similarity).
 MOD_RES 868 868 Phosphoserine (By similarity).
 CARBOHYD 166 166 N-linked (GlcNAc...) (Potential).
 CARBOHYD 392 392 N-linked (GlcNAc...) (Potential).
 CARBOHYD 546 546 N-linked (GlcNAc...) (Potential).
 CARBOHYD 629 629 N-linked (GlcNAc...) (Potential).  
Keyword
 Alternative splicing; Calcium; Cell adhesion; Cell junction; Cell membrane; Cleavage on pair of basic residues; Complete proteome; Direct protein sequencing; Glycoprotein; Hypotrichosis; Membrane; Metal-binding; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 896 AA 
Protein Sequence
MAAAGPRRSV RGAVCLHLLL TLVIFSRAGE ACKKVILNVP SKLEADKIIG RVNLEECFRS 60
ADLIRSSDPD FRVLNDGSVY TARAVALSDK KRSFTIWLSD KRKQTQKEVT VLLEHQKKVS 120
KTRHTRETVL RRAKRRWAPI PCSMQENSLG PFPLFLQQVE SDAAQNYTVF YSISGRGVDK 180
EPLNLFYIER DTGNLFCTRP VDREEYDVFD LIAYASTADG YSADLPLPLP IRVEDENDNH 240
PVFTEAIYNF EVLESSRPGT TVGVVCATDR DEPDTMHTRL KYSILQQTPR SPGLFSVHPS 300
TGVITTVSHY LDREVVDKYS LIMKVQDMDG QFFGLIGTST CIITVTDSND NAPTFRQNAY 360
EAFVEENAFN VEILRIPIED KDLINTANWR VNFTILKGNE NGHFKISTDK ETNEGVLSVV 420
KPLNYEENRQ VNLEIGVNNE APFARDIPRV TALNRALVTV HVRDLDEGPE CTPAAQYVRI 480
KENLAVGSKI NGYKAYDPEN RNGNGLRYKK LHDPKGWITI DEISGSIITS KILDREVETP 540
KNELYNITVL AIDKDDRSCT GTLAVNIEDV NDNPPEILQE YVVICKPKMG YTDILAVDPD 600
EPVHGAPFYF SLPNTSPEIS RLWSLTKVND TAARLSYQKN AGFQEYTIPI TVKDRAGQAA 660
TKLLRVNLCE CTHPTQCRAT SRSTGVILGK WAILAILLGI ALLFSVLLTL VCGVFGATKG 720
KRFPEDLAQQ NLIISNTEAP GDDRVCSANG FMTQTTNNSS QGFCGTMGSG MKNGGQETIE 780
MMKGGNQTLE SCRGAGHHHT LDSCRGGHTE VDNCRYTYSE WHSFTQPRLG EKLHRCNQNE 840
DRMPSQDYVL TYNYEGRGSP AGSVGCCSEK QEEDGLDFLN NLEPKFITLA EACTKR 896 
Gene Ontology
 GO:0005911; C:cell-cell junction; TAS:ProtInc.
 GO:0005737; C:cytoplasm; IEA:Compara.
 GO:0030057; C:desmosome; IEA:UniProtKB-SubCell.
 GO:0005576; C:extracellular region; IEA:Compara.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005886; C:plasma membrane; TAS:ProtInc.
 GO:0005509; F:calcium ion binding; IEA:InterPro.
 GO:0007155; P:cell adhesion; TAS:ProtInc.
 GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
 GO:0001701; P:in utero embryonic development; IEA:Compara.
 GO:0050821; P:protein stabilization; IDA:BHF-UCL. 
Interpro
 IPR002126; Cadherin.
 IPR015919; Cadherin-like.
 IPR009124; Cadherin/Desmocollin.
 IPR020894; Cadherin_CS.
 IPR000233; Cadherin_cytoplasmic-dom.
 IPR014868; Cadherin_pro_dom.
 IPR027397; Catenin_binding_dom.
 IPR009122; Desmosomal_cadherin. 
Pfam
 PF00028; Cadherin
 PF01049; Cadherin_C
 PF08758; Cadherin_pro 
SMART
 SM00112; CA
 SM01055; Cadherin_pro 
PROSITE
 PS00232; CADHERIN_1
 PS50268; CADHERIN_2 
PRINTS
 PR00205; CADHERIN.
 PR01818; DESMOCADHERN.
 PR01820; DESMOCOLLIN.