CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005371
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Flavoprotein-like protein YCP4 
Protein Synonyms/Alias
  
Gene Name
 YCP4 
Gene Synonyms/Alias
 YCR004C; YCR042; YCR4C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
32GVEAAGGKADIYRVEubiquitination[1]
55TKMNAPQKPEDIPVAubiquitination[1]
191RIAEIQGKTFYETAKacetylation[2]
191RIAEIQGKTFYETAKubiquitination[1]
207LFPAKEAKPSTEKKTubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
  
Sequence Annotation
 DOMAIN 4 193 Flavodoxin-like.
 MOD_RES 244 244 Cysteine methyl ester (Potential).
 LIPID 243 243 S-palmitoyl cysteine (Probable).
 LIPID 244 244 S-farnesyl cysteine (Potential).  
Keyword
 Complete proteome; Cytoplasm; Lipoprotein; Membrane; Methylation; Mitochondrion; Palmitate; Prenylation; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 247 AA 
Protein Sequence
MVKIAIITYS TYGHIDVLAQ AVKKGVEAAG GKADIYRVEE TLPDEVLTKM NAPQKPEDIP 60
VATEKTLLEY DAFLFGVPTR FGNLPAQWSA FWDKTGGLWA KGSLNGKAAG IFVSTSSYGG 120
GQESTVKACL SYLAHHGIIF LPLGYKNSFA ELASIEEVHG GSPWGAGTLA GPDGSRTASP 180
LELRIAEIQG KTFYETAKKL FPAKEAKPST EKKTTTSDAA KRQTKPAAAT TAEKKEDKGL 240
LSCCTVM 247 
Gene Ontology
 GO:0045121; C:membrane raft; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:SGD.
 GO:0005886; C:plasma membrane; IDA:SGD.
 GO:0009055; F:electron carrier activity; ISS:SGD.
 GO:0010181; F:FMN binding; IEA:InterPro.
 GO:0016491; F:oxidoreductase activity; IEA:InterPro.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IEA:InterPro.
 GO:0055114; P:oxidation-reduction process; IEA:GOC. 
Interpro
 IPR008254; Flavodoxin/NO_synth.
 IPR010089; Flavoprotein_WrbA. 
Pfam
 PF00258; Flavodoxin_1 
SMART
  
PROSITE
 PS50902; FLAVODOXIN_LIKE 
PRINTS