CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-039290
UniProt Accession
F1M516_RAT
;
F1M516
Genbank Protein ID
AABR06023289
Genbank Nucleotide ID
Protein Name
Uncharacterized protein
Protein Synonyms/Alias
Gene Name
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Rattus norvegicus (Rat)
NCBI Taxa ID
10116
Lysine Modification
Position
Peptide
Type
References
33
SDTIEDV
K
AKIQDKE
ubiquitination
[1]
54
QRLIFAG
K
QPEDGRL
ubiquitination
[1]
Reference
[1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
J Proteome Res. 2012 Sep 7;11(9):4722-32. [
PMID: 22871113
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
158 AA
Protein Sequence
GGAAATLQIF VKALPGKTIM LEVEPSDTIE DVKAKIQDKE GIPPDQQRLI FAGKQPEDGR 60
LSDYNIQKES TLHLVLSRRD AAKKRKKSYT IPKKNKHKRK KVKLAVLKYY KVDENAKISR 120
LRRECPSDEY GGVIMGSHFV RRYCGKCCLT YWRKPEHS 158
Gene Ontology
GO:0005840
; C:ribosome; IEA:InterPro.
GO:0003735
; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412
; P:translation; IEA:InterPro.
Interpro
IPR002906
; Ribosomal_S27a.
IPR000626
; Ubiquitin.
IPR019954
; Ubiquitin_CS.
IPR019956
; Ubiquitin_subgr.
IPR019955
; Ubiquitin_supergroup.
Pfam
PF01599
; Ribosomal_S27
PF00240
; ubiquitin
SMART
SM00213
; UBQ
PROSITE
PS00299
; UBIQUITIN_1
PS50053
; UBIQUITIN_2
PRINTS
PR00348
; UBIQUITIN.