CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001522
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein YIF1A 
Protein Synonyms/Alias
 54TMp; YIP1-interacting factor homolog A 
Gene Name
 YIF1A 
Gene Synonyms/Alias
 54TM; HYIF1P; YIF1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
13GYGAHGSKHRARAAPubiquitination[1]
80HGKDMVHKELHRFVSubiquitination[1, 2]
90HRFVSVSKLKYFFAVubiquitination[1, 2]
92FVSVSKLKYFFAVDTubiquitination[1]
104VDTAYVAKKLGLLVFubiquitination[2]
105DTAYVAKKLGLLVFPubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Possible role in transport between endoplasmic reticulum and Golgi. 
Sequence Annotation
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 12 12 Phosphoserine.  
Keyword
 Acetylation; Complete proteome; Endoplasmic reticulum; ER-Golgi transport; Golgi apparatus; Membrane; Phosphoprotein; Protein transport; Reference proteome; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 293 AA 
Protein Sequence
MAYHSGYGAH GSKHRARAAP DPPPLFDDTS GGYSSQPGGY PATGADVAFS VNHLLGDPMA 60
NVAMAYGSSI ASHGKDMVHK ELHRFVSVSK LKYFFAVDTA YVAKKLGLLV FPYTHQNWEV 120
QYSRDAPLPP RQDLNAPDLY IPTMAFITYV LLAGMALGIQ KRFSPEVLGL CASTALVWVV 180
MEVLALLLGL YLATVRSDLS TFHLLAYSGY KYVGMILSVL TGLLFGSDGY YVALAWTSSA 240
LMYFIVRSLR TAALGPDSMG GPVPRQRLQL YLTLGAAAFQ PLIIYWLTFH LVR 293 
Gene Ontology
 GO:0005813; C:centrosome; IDA:HPA.
 GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.
 GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IDA:UniProtKB.
 GO:0005794; C:Golgi apparatus; IDA:HPA.
 GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0006987; P:activation of signaling protein activity involved in unfolded protein response; TAS:Reactome.
 GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW. 
Interpro
 IPR005578; Hrf1. 
Pfam
 PF03878; YIF1 
SMART
  
PROSITE
  
PRINTS