CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035789
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Chromodomain helicase DNA binding protein 2 (Predicted) 
Protein Synonyms/Alias
 Protein Chd2 
Gene Name
 Chd2 
Gene Synonyms/Alias
 Chd2_predicted; rCG_24584 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
1148AEIRRFIKAYKKFGLacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; Helicase; Hydrolase; Nucleotide-binding; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1834 AA 
Protein Sequence
MMRNKDKSQE EDSSLHSNAS SHSASEEASA SDSGSQSESE QGSDPGSGHG SESNSSSESS 60
ESQSESESES AGSKSQPVLP EAKEKPASKK ERIADVKKMW EEYPDVYGVR RSNRSRQEPS 120
RFNIKEEASS GSESGSPKRR GQRQLKKQEK WKQDPSEDDQ EQGSSAESEA EQKKVKARRP 180
IPRRTVPKPQ VKKQPKIQRG KRKKQESSDD DDDDDEAPKR QTRRRAAKNV SYKEDDDFET 240
DSDDLIEMTG EGVDEQQDNS ETIEKVLDSR LGKKGVDLNP FAATGASTTV YAVEANGDPS 300
GDFDTEREEG EIQYLIKWKG WSYIHSTWES EESLQQQKVK GLKKLENFKK KEDEIKQWLG 360
KVSPEDVEYF NCQQELASEL NKQYQIVERV IAVKTSKSAL GQTDFPAHSR KPAPSNEPEY 420
LCKWMGLPYS ECSWEDEALI GKKFQSCIDS FHSRNNSKTI PTRECKALKQ RPRFVALKKQ 480
PAYLGGENLE LRDYQLEGLN WLAHSWCKSN SVILADEMGL GKTIQTISFL SYLFHQHQLY 540
GPFLIVVPLS TLTSWQREFE IWAPEVNVVV YIGDLMSRNT IREYEWIHSQ TKRLKFNALI 600
TTYEILLKDK TVLGSINWAF LGVDEAHRLK NDDSLLYKTL IDFKSNHRLL ITGTPLQNSL 660
KELWSLLHFI MPEKFEFWED FEEDHGKGRE NGYQSLHKVL EPFLLRRVKK DVEKSLPAKV 720
EQILRVEMSA LQKQYYKWIL TRNYKALAKG TRGSTSGFLN IVMELKKCCN HCYLIRAPED 780
SERETGQEVL QSLIRSSGKL ILLDKLLTRL RERGNRVLIF SQMVRMLDIL AEYLTIKHYP 840
FQRLDGSIKG EIRKQALDHF NADGSEDFCF LLSTRAGGLG INLASADTVV IFDSDWNPQN 900
DLQAQARAHR IGQKKQVNIY RLVTKGTVEE EIIERAKKKM VLDHLVIQRM DTTGRTVLEN 960
NSGRSNSNPF NKEELTAILK FGAEDLFKEI EGEESEPQEM DIDEILRLAE TRENEVSTSA 1020
TDELLSQFKV ANFATMEDEE ELEERPHKDW DEIIPEEQRK KVEEEERQKE LEEIYMLPRI 1080
RSSTKKAQTN DSDSDTESKR QAQRSSASES ETDDSDDDKK PKRRGRPRSV RKDLVEGFTD 1140
AEIRRFIKAY KKFGLPLERL ECIARDAELV DKSVADLKRL GELVHNSCVS AMQEYEEQLK 1200
ENASEGKGPG KRRGPTIKIS GVQVNVKSII QHEEEFEMLH KSIPVDPEEK KKYCLTCRVK 1260
AAHFDVEWGV EDDSRLLLGI YEHGYGNWEL IKTDPELKLT DKILPVETDK KPQGKQLQTR 1320
VDYLLKLLRK GLEKKGTVTS GEEAKLKKRK PRVKKENKAP RLKDEHGLEL SSPRHSDNPS 1380
EEGEVKDDGL EKSPTKKKQK KKENKENKEK PVSSRKDREG DKEKKKSKDK KEKVKGGDAK 1440
SSSKSKRSQG PVHITAGSEP VPIGEDEDDD LDQETFSICK ERMRPVKKAL KQLDKPDKGL 1500
NVQEQLEHTR SCLLKIGDRI AECLRAYSEQ EHIKLWRRNL WIFVSKFTEF DARKLHKLYK 1560
MAHKKRSQEE EEQKKKDDTL GGKKPFRPEA SGSSRDSLIS QSHASHNLHP QKPHLPASHG 1620
PQMHGHPRDT YSHPNKRHFS NADRGDWQRE RKFNYGGGNN APWGGDRHHQ YEQHWYKDHH 1680
YGDRRHMDAH RSGSYRPNNM SRKRPYEQYN SDRDHRGHRD YYDRHHHDSK RRRSDDFRPQ 1740
NYHQQDFRRM SDHRPTMGYH GQGPSDHYRS FHTDKLGEYK QPMPTLHTAL SDPRSPPAQK 1800
SPHDSKSPLD HRSPLERSLE QKNNPDYNWN VRKT 1834 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0004386; F:helicase activity; IEA:UniProtKB-KW. 
Interpro
 IPR023780; Chromo_domain.
 IPR000953; Chromo_domain/shadow.
 IPR016197; Chromodomain-like.
 IPR023779; Chromodomain_CS.
 IPR025260; DUF4208.
 IPR014001; Helicase_ATP-bd.
 IPR001650; Helicase_C.
 IPR027417; P-loop_NTPase.
 IPR000330; SNF2_N. 
Pfam
 PF00385; Chromo
 PF13907; DUF4208
 PF00271; Helicase_C
 PF00176; SNF2_N 
SMART
 SM00298; CHROMO
 SM00487; DEXDc
 SM00490; HELICc 
PROSITE
 PS00598; CHROMO_1
 PS50013; CHROMO_2
 PS51192; HELICASE_ATP_BIND_1
 PS51194; HELICASE_CTER 
PRINTS