CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038689
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Vacuolar protein sorting-associated protein 13B 
Protein Synonyms/Alias
  
Gene Name
 Vps13b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
571DLGIVQEKSTKSLVIubiquitination[1]
842PMTGVKSKNPLPTLEubiquitination[1]
1238TMSKVWSKIQKRGNLacetylation[2]
1582LRKDIYQKALNLGILubiquitination[1]
1747ISKQEQKKVDTFDGGubiquitination[1]
2033KANLSFTKLDQINHFubiquitination[1]
2262QMPSPVEKTQAFKTEubiquitination[1]
2267VEKTQAFKTEQSSDDubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 3993 AA 
Protein Sequence
MLESYVTPIL MSYVNRYIKN LKPSDLQLSL WGGDVVLSKL ELKLDVLEQE LKLPFTFLSG 60
HIHELRIHVP WTKLGSEPVV ITINTMECIL KLKDGIQDDH ESCGSNSTNR STAENTKSSI 120
KPRRIQQAAP ADPDLPPGYV QSLIRRVVNN VNIVINNLIL KYVEDDIVLS VNITSAECYT 180
VGELWDRAFM DISATDLVLR KAINFSDCTV CLDKRNASGK IEFYQDPLLY KCSFRTRLHF 240
TYDNLNSKMP SVIKIHTLVE SLKLSITDQQ LPMFIRIMQL GIALYYGEIG NFKDGETEDP 300
PCLSKDTLAN LTGTEEESRI DMQYPAPYKG QELYSQDYEE PQGWVSWAWS FVPAIVSYDD 360
GEEDDLGTDP ASIMHQQKAQ TLKDPIVSVG FYCTKATVTF KLTEMQAENS YYSPQKVKSK 420
EVLCWEQEGT TIEALMMGEP FFDCQIGFVG CRAMCLKGIL GVKDFEEHMN RSETEACFFI 480
CGENLSTKGL TYLTNSLFDY RSPENNGTRA EFILDAAHHK ETHTDIAGIQ RFGAFYMDYL 540
YTVEHSSGKG PTSQQDFPSG KNEDLGIVQE KSTKSLVIGP LDCRLDSSAV HRVLKMIVCA 600
LEHEYEPYSR LKPESKDEKE TVLDPEEVSS LEEYIPTRHT SVTLLKCTCT VFMAEFNLLD 660
CLLPVIMGGK NSSNVTNATN FQSLRPLPSI QILVDKINLE HSVPMYAEQL VHVVSSLNQP 720
SDNLLHYCYV HCYLKVFGFQ AGLTCLDHSG SYCLPAPIIP SFSTALYGKL LKLPALWTKR 780
SQTVVTEGIF ELPNLTIQAT RAQTLLLQAI YQSWSHIGNV SSSTVNEALM NEVFPMTGVK 840
SKNPLPTLEG SIQNVELKYC STSLVKCASG TLGSIKICAK APGDSGKEKL IPLLQGPSDT 900
RDLHSSKWLN ESRKPESLLA PDLIAFTIQV PQYMDYCHHS GAVFLCSVQG LAVNIDPILY 960
TWVIYQPQKR ANRHAQQQPV VAVPLVTSVN RRKEDELSIG SAPLGKQQSY QASEYASSPI 1020
KTKTVTESRP VSVPVKAVLR VHEECRSPED KMKEFIAILW NAVKSLTLQL DVQSCCVFIP 1080
NDNLPSPSTI VSGDIPGTVR SWYHGQTSIP GTLVLCLPQI KIISAGHKYM EPLQEIPFVI 1140
PRPILEEGDA FPWTISLHHF SIYTLLGKQV TLSLVEPMGC TSTLAVTSQK LLPVGPDGRH 1200
SFVVCLHVDL ESLEIKCSNP QVQLIYELAD TMSKVWSKIQ KRGNLSPSSV YPETVAGPIP 1260
GSPVWSSVGT APPDTSTCSP SADIGTTTEG DSVQAGDDSP FSDSVTLEQT TSNIGGSSGR 1320
VSLWMQWVLP KATVKLFAPD LEKKGTEVCM VSELEDLSAS IDVQDVYTKV KCKVESFSID 1380
HYQSRPGEGW QSGHFEGVFL QCKEKPVTTT KLLDGAHQQH GFLSLTYTKA VTKNVRHKLT 1440
SRNERRSFYK LSEGLMDGSP HFLHEILLSA QAFDIVVCFP LLNAIASVFH TKLPKTQREK 1500
RKSSGQPMRT HTLTSRNLPL IYINTSVIRI FVPQTEETQS TVAVNQAAKE DTMVLKVGSI 1560
AMAPQADNPL GRSVLRKDIY QKALNLGILR DPGSEIEDRQ YQIDLQSINI GTAQWDQLKP 1620
EKGSGSGGVP TESERNSQNP ALEWNMASSI QRHQERRAIL TPILTDFSVR ITGAPAIIFT 1680
KIISQENLHM EEILVCGHSL EVNITTNLDF FLSVAQVQLL HQLIVANMTG LEPSTKATEI 1740
SKQEQKKVDT FDGGTAETSS RYSGAQDSGI GSDSVKIRIV QIEQYSGASQ HRIARPSHQS 1800
SIVKNLNFIP FDIFITASRI SLMTYSSVAL PKFKLPEQKE DGKTGRTFLN LAEVDSDVAK 1860
PNQACVSMVT AEDPLSSSTS FSSGKKVRVL SLESLHASTR SSARQALGVT VVRQPGRRGT 1920
GDLELDLFLH LIVSQPSLLL SCHHRKQRVE VSIFDAMLKG VPSDYTCTDP GKTLPEASDY 1980
NIVWLQTVPG ETDSKSGIPP SLVTLHIKDF LNGPADIYLD VSKPLKANLS FTKLDQINHF 2040
LKKIKKAHSS AHSKETSTPS DSILNMDEPP VPKCYRGKLS KTKVHCDEAQ KTSFQENIWR 2100
AISCFQKVSV HTTQIVVSME TVPHPHKPCV LASLSNLNGS LTVKAAQKVP GASLGSSFLL 2160
SIHDVLLKTS LKERSRILIG PFSATVNLEA KWCKHSGNPG PQQSIPKISM DLRGGLLQVF 2220
WGQEHLNCLA LLHELFNGYL QEGKSEMPVP ESAPQMPSPV EKTQAFKTEQ SSDDLRTGIF 2280
QYVQDAESLK LPGVYEVLFY NETEESPGMM LWRYPEPRVL TLVRITPVPF NTTEDPDIST 2340
ADLGDVLQVP CGLEYWDELQ KVFVAFQEFS LSESKVCELQ LPDINLVHDQ KKLVSSDLWR 2400
IVLNNNQNTT DDQSSASESG SQSTCEPLVT PTALAACTRV DSCFTPWFVP SLCMSFQFAH 2460
LEFRLCHHLD QLGTASPQYL QPFISDKNVP SELEYMIISF REPNLHLRQW NSGPVCQEIK 2520
FSSQMDCKLL ECRNVTMQTV VKPFGICGQM ALSSDGVQKL LDSTVIVDSV LVNFGQHVVH 2580
SLNTAIQAWQ QNKCPEVEEL VFSHFVICND TQETLRFGQV DTDENILLAS LHSHQYSWRS 2640
HKSPQLLHIC IEGWGNWRWS EPFTVDHAGT FIRTIQYKGR TASLIIKVRA LSGVQKQIII 2700
CGRQIICSYL SQSIELKVVQ HYIGQDGQAV VREHFDCLTA KQKLPSYILE NNELTELCVK 2760
AKGDEDWSRD VCLEPKASEY STVIQVPTSN SSIIYVWCTV LTLEPNSQVQ QRMIVFSPLF 2820
IMRSHLPDPI IIHLEKRSLG LSETQIIPGR GQENPLQNVE PDLVHHLTFQ AREEYDPSDC 2880
AVPISTALIK QIATKIQPGG TVNEMLDEFY GPEKSQEPTW PYSNKDSDRN EQLSQWDSPM 2940
RVKLSIWKPY VRTLLIELLP WALLINQSKW DLWLFEGEKI VLQVPAGKII IPPNFQEAFQ 3000
IGIYWENTNT VHKTLAIKLV HNLTSPKWKD GGNGEVVTLD EEAFVDAEIR LGAFPGHQKL 3060
CQFCISSMVQ HGIQVIQIED KTTVINNTPY QIVYKPHLAI SNSYSGKEHC HVPDSATFSI 3120
CPGGEHPAVR SSSLPCWDVT PAVGSSELDT ATLQKQILLG FSPVPGADSA QCWSLPAIIG 3180
GEFPRQSVAV PFGTGRENGF CTRAIALTYQ EHLGVTYITL SEDPSPRVVF HNRCPVPMLM 3240
KENIRDIPKF DVYCKKIPPE SSVHHELYHQ IISYPDCKTK DLLPSLFLRI DSMEEMTAEW 3300
SDPVDINSQG TQVVFLTGFG YVYVDIAQQC GTVFIILAPE GKAGPIFTST SRALERMVTF 3360
RMFITQLSLA VSDDLTHQAP SELLRLTLDN VFLHVSPVPA LLPGEEPPSS FFQLYGVEVY 3420
CGDLQLDNQL YNKSNFHFAV LVCQGERTDP AQYSRVQSLL VSSKALEEYK ENCFIKLCLT 3480
VSEGKDILLD VSEFTFELKP ARLYVEDTFV YYIKTLFDTY LPPSRMSGHH AQLFTGQQVL 3540
PVQVTQHAKA LVNAVKLRKL LIQPVNLLIS IHASLKLYIA SDHTPLSFSV FERGPVFTTA 3600
RQLVHALAMH YAAGALFRAG WVVGSLEILG SPASLVRSIG NGISDFFRLP YEGLTRGPGA 3660
FVSGVSRGTT SFVKHISKGA LTSITNLATS LARNMGRLSL DEEHYNRQEE WRRQLPESLG 3720
EGLRQGLSRL GISLLGAIAG IVDQPMQNFQ KTSETQASAG HKAKGVISGV GKGIMGVFTK 3780
PIGGAAELVS QTGYGILHGA GLSQLPKQRC QPTHLYADQA PNSHVKYVWK MLQSLGRPEV 3840
HMALDVVLVR GSGQEHEGCL LLTSEVLFVV SISEDTQQQA FPITEISCAQ DTKQNNLLTV 3900
QLKQPRVASD VEIDGARERL SEQQFKRLVD YIAKTSCHLA PSCSSMQTCS VVAVEPPPAT 3960
VKTYHYLVDP HFAQVFISKF TMVKNKALRK GFS 3993 
Gene Ontology
  
Interpro
 IPR015412; Autophagy-rel_C.
 IPR026847; VPS13.
 IPR026854; VPS13A_N.
 IPR009543; VPSAP_dom. 
Pfam
 PF09333; ATG_C
 PF12624; Chorein_N
 PF06650; DUF1162 
SMART
  
PROSITE
  
PRINTS