CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004928
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Biosynthetic arginine decarboxylase 
Protein Synonyms/Alias
 ADC 
Gene Name
 speA 
Gene Synonyms/Alias
 b2938; JW2905 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
34MSSQEASKMLRTYNIacetylation[1]
77VDLAQLVKTREAQGQacetylation[1]
108RSINAAFKRARESYGacetylation[1]
127YFLVYPIKVNQHRRVacetylation[1]
175VIVCNGYKDREYIRLacetylation[1]
188RLALIGEKMGHKVYLacetylation[1]
192IGEKMGHKVYLVIEKacetylation[1]
232LASQGSGKWQSSGGEacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the biosynthesis of agmatine from arginine (By similarity). 
Sequence Annotation
 REGION 307 317 Substrate-binding (Potential).
 MOD_RES 127 127 N6-(pyridoxal phosphate)lysine (By  
Keyword
 3D-structure; Complete proteome; Decarboxylase; Lyase; Magnesium; Metal-binding; Periplasm; Polyamine biosynthesis; Putrescine biosynthesis; Pyridoxal phosphate; Reference proteome; Spermidine biosynthesis. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 658 AA 
Protein Sequence
MSDDMSMGLP SSAGEHGVLR SMQEVAMSSQ EASKMLRTYN IAWWGNNYYD VNELGHISVC 60
PDPDVPEARV DLAQLVKTRE AQGQRLPALF CFPQILQHRL RSINAAFKRA RESYGYNGDY 120
FLVYPIKVNQ HRRVIESLIH SGEPLGLEAG SKAELMAVLA HAGMTRSVIV CNGYKDREYI 180
RLALIGEKMG HKVYLVIEKM SEIAIVLDEA ERLNVVPRLG VRARLASQGS GKWQSSGGEK 240
SKFGLAATQV LQLVETLREA GRLDSLQLLH FHLGSQMANI RDIATGVRES ARFYVELHKL 300
GVNIQCFDVG GGLGVDYEGT RSQSDCSVNY GLNEYANNII WAIGDACEEN GLPHPTVITE 360
SGRAVTAHHT VLVSNIIGVE RNEYTVPTAP AEDAPRALQS MWETWQEMHE PGTRRSLREW 420
LHDSQMDLHD IHIGYSSGIF SLQERAWAEQ LYLSMCHEVQ KQLDPQNRAH RPIIDELQER 480
MADKMYVNFS LFQSMPDAWG IDQLFPVLPL EGLDQVPERR AVLLDITCDS DGAIDHYIDG 540
DGIATTMPMP EYDPENPPML GFFMVGAYQE ILGNMHNLFG DTEAVDVFVF PDGSVEVELS 600
DEGDTVADML QYVQLDPKTL LTQFRDQVKK TDLDAELQQQ FLEEFEAGLY GYTYLEDE 658 
Gene Ontology
 GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
 GO:0008792; F:arginine decarboxylase activity; IDA:EcoCyc.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006527; P:arginine catabolic process; IDA:EcoCyc.
 GO:0009446; P:putrescine biosynthetic process; IDA:EcoCyc.
 GO:0008295; P:spermidine biosynthetic process; IEA:HAMAP. 
Interpro
 IPR009006; Ala_racemase/Decarboxylase_C.
 IPR002985; Arg_decrbxlase.
 IPR022643; De-COase2_C.
 IPR022657; De-COase2_CS.
 IPR022644; De-COase2_N.
 IPR022653; De-COase2_pyr-phos_BS.
 IPR000183; Orn/DAP/Arg_de-COase. 
Pfam
 PF02784; Orn_Arg_deC_N
 PF00278; Orn_DAP_Arg_deC 
SMART
  
PROSITE
 PS00878; ODR_DC_2_1
 PS00879; ODR_DC_2_2 
PRINTS
 PR01180; ARGDCRBXLASE.
 PR01179; ODADCRBXLASE.