CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003095
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Putative Holliday junction resolvase 
Protein Synonyms/Alias
  
Gene Name
 yqgF 
Gene Synonyms/Alias
 b2949; JW2916 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
34ARPLPAIKAQDGTPDacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Could be a nuclease that resolves Holliday junction intermediates in genetic recombination. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Cytoplasm; DNA damage; DNA recombination; DNA repair; Hydrolase; Nuclease; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 138 AA 
Protein Sequence
MSGTLLAFDF GTKSIGVAVG QRITGTARPL PAIKAQDGTP DWNIIERLLK EWQPDEIIVG 60
LPLNMDGTEQ PLTARARKFA NRIHGRFGVE VKLHDERLST VEARSGLFEQ GGYRALNKGK 120
VDSASAVIIL ESYFEQGY 138 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
 GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
 GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IEA:GOC.
 GO:0031564; P:transcription antitermination; IGI:EcoCyc. 
Interpro
 IPR005227; Resolv_Hlld_junc_YqgF-like.
 IPR012337; RNaseH-like_dom.
 IPR006641; YqgF/RNaseH-like_dom. 
Pfam
 PF03652; UPF0081 
SMART
 SM00732; YqgFc 
PROSITE
  
PRINTS