CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003027
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S12 
Protein Synonyms/Alias
  
Gene Name
 rpsL 
Gene Synonyms/Alias
 strA; b3342; JW3304 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
108ALDCSGVKDRKQARSacetylation[1]
Reference
 [1] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842
Functional Description
 With S4 and S5 plays an important role in translational accuracy. 
Sequence Annotation
 MOD_RES 89 89 3-methylthioaspartic acid.
 MOD_RES 108 108 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Antibiotic resistance; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; tRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 124 AA 
Protein Sequence
MATVNQLVRK PRARKVAKSN VPALEACPQK RGVCTRVYTT TPKKPNSALR KVCRVRLTNG 60
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCSGVKDR KQARSKYGVK 120
RPKA 124 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoCyc.
 GO:0034336; F:misfolded RNA binding; IDA:EcoCyc.
 GO:0019843; F:rRNA binding; IDA:EcoCyc.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0000049; F:tRNA binding; IEA:HAMAP.
 GO:0000372; P:Group I intron splicing; IDA:EcoCyc.
 GO:0033120; P:positive regulation of RNA splicing; IDA:EcoCyc.
 GO:0046677; P:response to antibiotic; IEA:UniProtKB-KW.
 GO:0034337; P:RNA folding; IDA:EcoCyc.
 GO:0006412; P:translation; IMP:EcoCyc. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR006032; Ribosomal_S12/S23.
 IPR005679; Ribosomal_S12_bac. 
Pfam
 PF00164; Ribosomal_S12 
SMART
  
PROSITE
 PS00055; RIBOSOMAL_S12 
PRINTS
 PR01034; RIBOSOMALS12.