CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003225
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribosomal large subunit pseudouridine synthase C 
Protein Synonyms/Alias
 23S rRNA pseudouridine(955/2504/2580) synthase; rRNA pseudouridylate synthase C; rRNA-uridine isomerase C 
Gene Name
 rluC 
Gene Synonyms/Alias
 yceC; b1086; JW1072 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
35TQLKGVPKSMIYRILacetylation[1]
59KRIKPEYKLEAGDEVacetylation[1]
174LREKGMQKDYLALVRacetylation[1, 2]
189GQWQSHVKSVQAPLLacetylation[1]
197SVQAPLLKNILQSGEacetylation[1]
288FLHAAALKFTHPGTGacetylation[1]
309APMDEGLKRCLQKLRacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA. 
Sequence Annotation
 DOMAIN 20 83 S4 RNA-binding.
 ACT_SITE 144 144 By similarity.  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Isomerase; Reference proteome; RNA-binding; rRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 319 AA 
Protein Sequence
MKTETPSVKI VAITADEAGQ RIDNFLRTQL KGVPKSMIYR ILRKGEVRVN KKRIKPEYKL 60
EAGDEVRIPP VRVAEREEEA VSPHLQKVAA LADVILYEDD HILVLNKPSG TAVHGGSGLS 120
FGVIEGLRAL RPEARFLELV HRLDRDTSGV LLVAKKRSAL RSLHEQLREK GMQKDYLALV 180
RGQWQSHVKS VQAPLLKNIL QSGERIVRVS QEGKPSETRF KVEERYAFAT LVRCSPVTGR 240
THQIRVHTQY AGHPIAFDDR YGDREFDRQL TEAGTGLNRL FLHAAALKFT HPGTGEVMRI 300
EAPMDEGLKR CLQKLRNAR 319 
Gene Ontology
 GO:0009982; F:pseudouridine synthase activity; IDA:EcoCyc.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IDA:EcoliWiki. 
Interpro
 IPR020103; PsdUridine_synth_cat_dom.
 IPR006225; PsdUridine_synth_RluC/D.
 IPR006224; PsdUridine_synth_RluC/D_CS.
 IPR006145; PsdUridine_synth_RsuA/RluD.
 IPR002942; S4_RNA-bd. 
Pfam
 PF00849; PseudoU_synth_2
 PF01479; S4 
SMART
 SM00363; S4 
PROSITE
 PS01129; PSI_RLU
 PS50889; S4 
PRINTS