CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-035351
UniProt Accession
D3ZYW5_RAT
;
D3ZYW5
Genbank Protein ID
AABR06003331
;
CH474102
Genbank Nucleotide ID
EDL83189.1
Protein Name
Protein Zim1
Protein Synonyms/Alias
RCG32037
Gene Name
Zim1
Gene Synonyms/Alias
rCG_32037
Created Date
July 27, 2013
Organism
Rattus norvegicus (Rat)
NCBI Taxa ID
10116
Lysine Modification
Position
Peptide
Type
References
568
ATLLIHQ
K
KHNKKKP
ubiquitination
[1]
Reference
[1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
J Proteome Res. 2012 Sep 7;11(9):4722-32. [
PMID: 22871113
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
578 AA
Protein Sequence
MKRKSVSEVK TTAPVNEALP SPNPDQTPNQ LSEKKRRIPT TSLPTWYKEP VIFKDVAVYF 60
SQKEWQLLEP AQKDLYKDVM LENYGNLISV EYYIFKPKLI TRLEQGIDLF AKENDTPGDP 120
QQGEAGVSRS DTSAGKKTGN NSTKAETRKP DNSKNVSQEK LKKADQGGGS QNLRAEKTSK 180
SDDRPSQNKE KSDSTSTTEA GKTTNPGNQE NESAAPGTSS SQTPSTTAPQ STPPEKSTSG 240
KDGQGKSPNT SSSTNPKRKP ARQGKNHFKC KECGKTFNQT LHLVEHERIH TGEKPHKCDT 300
CGKSFRHLSY FLTHYRIHTG VRPYKCKECG KAFNSSSTLN NHCRIHSGEK PFKCDECGKT 360
FKQSTKLTRH QRIHTGEKPY KCGECNKCFG RSSSLREHKR IHTGEKPYRC QVCGKTFRVN 420
SHLSEHQRLH LKVKPYKCDK CGKHFRNSSY LSEHKQIHVP GARVDCPECG KVFACKVALL 480
KHQKRHEANS RYRCKGCGKT FRCKSSIQRH ERLHAGEKPF VCTKCDKGFT DKTTLNNHLK 540
IHSGDRPDPC AQCGRTFKKL ATLLIHQKKH NKKKPTDE 578
Gene Ontology
GO:0005622
; C:intracellular; IEA:InterPro.
GO:0003676
; F:nucleic acid binding; IEA:InterPro.
GO:0008270
; F:zinc ion binding; IEA:InterPro.
GO:0006355
; P:regulation of transcription, DNA-dependent; IEA:InterPro.
Interpro
IPR001909
; Krueppel-associated_box.
IPR007087
; Znf_C2H2.
IPR015880
; Znf_C2H2-like.
IPR013087
; Znf_C2H2/integrase_DNA-bd.
Pfam
PF01352
; KRAB
SMART
SM00349
; KRAB
SM00355
; ZnF_C2H2
PROSITE
PS50805
; KRAB
PS00028
; ZINC_FINGER_C2H2_1
PS50157
; ZINC_FINGER_C2H2_2
PRINTS