CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007812
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Alpha-internexin 
Protein Synonyms/Alias
 Alpha-Inx; 66 kDa neurofilament protein; NF-66; Neurofilament-66 
Gene Name
 Ina 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
95KIIRTNEKEQLQGLNubiquitination[1]
216ARLDLEKKVESLLDEubiquitination[1]
288QSAEEWYKSKFANLNubiquitination[1]
290AEEWYKSKFANLNEQubiquitination[1]
438ILSSTASKVSSAGLSubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Class-IV neuronal intermediate filament that is able to self-assemble. It is involved in the morphogenesis of neurons. It may form an independent structural network without the involvement of other neurofilaments or it may cooperate with NF-L to form the filamentous backbone to which NF-M and NF-H attach to form the cross-bridges (By similarity). 
Sequence Annotation
 REGION 1 87 Head.
 REGION 88 408 Rod.
 REGION 88 129 Coil 1A.
 REGION 130 142 Linker 1.
 REGION 143 238 Coil 1B.
 REGION 239 262 Linker 2.
 REGION 263 408 Coil 2.
 REGION 409 504 Tail.
 MOD_RES 72 72 Phosphoserine.
 MOD_RES 290 290 N6-acetyllysine (By similarity).
 MOD_RES 335 335 Phosphoserine.
 MOD_RES 501 501 Phosphoserine (By similarity).  
Keyword
 Acetylation; Coiled coil; Complete proteome; Developmental protein; Differentiation; Direct protein sequencing; Glycoprotein; Intermediate filament; Neurogenesis; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 504 AA 
Protein Sequence
MSFGSEHYLC SASSYRKVFG DSSRLSARLS GPGGSGSFRS QSLSRSNVAS TAACSSASSL 60
GLGLAYRRLP ASDGLDLSQA AARTNEYKII RTNEKEQLQG LNDRFAVFIE KVHQLETQNR 120
ALEAELAALR QRHAEPSRVG ELFQRELREL RAQLEEASSA RAQALLERDG LAEEVQRLRA 180
RCEEESRGRE GAERALKAQQ RDVDGATLAR LDLEKKVESL LDELAFVRQV HDEEVAELLA 240
TLQASSQAAA EVDVAVAKPD LTSALREIRA QYESLAAKNL QSAEEWYKSK FANLNEQAAR 300
STEAIRASRE EIHEYRRQLQ ARTIEIEGLR GANESLERQI LELEERHSAE VAGYQDSIGQ 360
LESDLRNTKS EMARHLREYQ DLLNVKMALD IEIAAYRKLL EGEETRFSTG GLSISGLNPL 420
PNPSYLLPPR ILSSTASKVS SAGLSLKKED EEEEEEEEDA SKEVSKKTSK VGEGFEETLG 480
EAVISTKKTG KSATEESTSS SQKM 504 
Gene Ontology
 GO:0005883; C:neurofilament; IDA:MGI.
 GO:0005198; F:structural molecule activity; IEA:InterPro.
 GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
 GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
 GO:0060052; P:neurofilament cytoskeleton organization; IGI:MGI. 
Interpro
 IPR016044; F.
 IPR001664; IF.
 IPR006821; Intermed_filament_DNA-bd.
 IPR018039; Intermediate_filament_CS. 
Pfam
 PF00038; Filament
 PF04732; Filament_head 
SMART
  
PROSITE
 PS00226; IF 
PRINTS