CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012035
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Glutamate receptor ionotropic, NMDA 2B 
Protein Synonyms/Alias
 GluN2B; Glutamate [NMDA] receptor subunit epsilon-2; N-methyl D-aspartate receptor subtype 2B; NMDAR2B; NR2B; N-methyl-D-aspartate receptor subunit 3; NR3; hNR3 
Gene Name
 GRIN2B 
Gene Synonyms/Alias
 NMDAR2B 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
1280TSNASTTKYPQSPTNacetylation[1]
1289PQSPTNSKAQKKNRNacetylation[1]
Reference
 [1] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786
Functional Description
 NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. In concert with DAPK1 at extrasynaptic sites, acts as a central mediator for stroke damage. Its phosphorylation at Ser-1303 by DAPK1 enhances synaptic NMDA receptor channel activity inducing injurious Ca2+ influx through them, resulting in an irreversible neuronal death (By similarity). 
Sequence Annotation
 REGION 1292 1304 Interaction with DAPK1 (By similarity).
 MOTIF 1482 1484 PDZ-binding (By similarity).
 METAL 127 127 Zinc (By similarity).
 METAL 284 284 Zinc (By similarity).
 MOD_RES 917 917 Phosphoserine (By similarity).
 MOD_RES 930 930 Phosphoserine (By similarity).
 MOD_RES 932 932 Phosphotyrosine (By similarity).
 MOD_RES 949 949 Phosphotyrosine (By similarity).
 MOD_RES 962 962 Phosphotyrosine (By similarity).
 MOD_RES 1039 1039 Phosphotyrosine (By similarity).
 MOD_RES 1049 1049 Phosphotyrosine (By similarity).
 MOD_RES 1061 1061 Phosphoserine (By similarity).
 MOD_RES 1065 1065 Phosphothreonine (By similarity).
 MOD_RES 1070 1070 Phosphotyrosine (By similarity).
 MOD_RES 1109 1109 Phosphotyrosine (By similarity).
 MOD_RES 1155 1155 Phosphotyrosine (By similarity).
 MOD_RES 1166 1166 Phosphoserine (By similarity).
 MOD_RES 1252 1252 Phosphotyrosine (By similarity).
 MOD_RES 1303 1303 Phosphoserine; by DAPK1 (By similarity).
 MOD_RES 1474 1474 Phosphotyrosine (By similarity).
 CARBOHYD 74 74 N-linked (GlcNAc...) (Potential).
 CARBOHYD 341 341 N-linked (GlcNAc...) (Potential).
 CARBOHYD 348 348 N-linked (GlcNAc...) (Potential).
 CARBOHYD 444 444 N-linked (GlcNAc...) (Potential).
 CARBOHYD 491 491 N-linked (GlcNAc...) (Potential).
 CARBOHYD 542 542 N-linked (GlcNAc...) (Potential).
 CARBOHYD 688 688 N-linked (GlcNAc...) (Potential).
 DISULFID 86 321 By similarity.  
Keyword
 3D-structure; Calcium; Cell junction; Cell membrane; Chromosomal rearrangement; Complete proteome; Disease mutation; Disulfide bond; Glycoprotein; Ion channel; Ion transport; Ligand-gated ion channel; Magnesium; Membrane; Mental retardation; Metal-binding; Phosphoprotein; Polymorphism; Postsynaptic cell membrane; Receptor; Reference proteome; Signal; Synapse; Transmembrane; Transmembrane helix; Transport; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1484 AA 
Protein Sequence
MKPRAECCSP KFWLVLAVLA VSGSRARSQK SPPSIGIAVI LVGTSDEVAI KDAHEKDDFH 60
HLSVVPRVEL VAMNETDPKS IITRICDLMS DRKIQGVVFA DDTDQEAIAQ ILDFISAQTL 120
TPILGIHGGS SMIMADKDES SMFFQFGPSI EQQASVMLNI MEEYDWYIFS IVTTYFPGYQ 180
DFVNKIRSTI ENSFVGWELE EVLLLDMSLD DGDSKIQNQL KKLQSPIILL YCTKEEATYI 240
FEVANSVGLT GYGYTWIVPS LVAGDTDTVP AEFPTGLISV SYDEWDYGLP ARVRDGIAII 300
TTAASDMLSE HSFIPEPKSS CYNTHEKRIY QSNMLNRYLI NVTFEGRNLS FSEDGYQMHP 360
KLVIILLNKE RKWERVGKWK DKSLQMKYYV WPRMCPETEE QEDDHLSIVT LEEAPFVIVE 420
SVDPLSGTCM RNTVPCQKRI VTENKTDEEP GYIKKCCKGF CIDILKKISK SVKFTYDLYL 480
VTNGKHGKKI NGTWNGMIGE VVMKRAYMAV GSLTINEERS EVVDFSVPFI ETGISVMVSR 540
SNGTVSPSAF LEPFSADVWV MMFVMLLIVS AVAVFVFEYF SPVGYNRCLA DGREPGGPSF 600
TIGKAIWLLW GLVFNNSVPV QNPKGTTSKI MVSVWAFFAV IFLASYTANL AAFMIQEEYV 660
DQVSGLSDKK FQRPNDFSPP FRFGTVPNGS TERNIRNNYA EMHAYMGKFN QRGVDDALLS 720
LKTGKLDAFI YDAAVLNYMA GRDEGCKLVT IGSGKVFAST GYGIAIQKDS GWKRQVDLAI 780
LQLFGDGEME ELEALWLTGI CHNEKNEVMS SQLDIDNMAG VFYMLGAAMA LSLITFICEH 840
LFYWQFRHCF MGVCSGKPGM VFSISRGIYS CIHGVAIEER QSVMNSPTAT MNNTHSNILR 900
LLRTAKNMAN LSGVNGSPQS ALDFIRRESS VYDISEHRRS FTHSDCKSYN NPPCEENLFS 960
DYISEVERTF GNLQLKDSNV YQDHYHHHHR PHSIGSASSI DGLYDCDNPP FTTQSRSISK 1020
KPLDIGLPSS KHSQLSDLYG KFSFKSDRYS GHDDLIRSDV SDISTHTVTY GNIEGNAAKR 1080
RKQQYKDSLK KRPASAKSRR EFDEIELAYR RRPPRSPDHK RYFRDKEGLR DFYLDQFRTK 1140
ENSPHWEHVD LTDIYKERSD DFKRDSVSGG GPCTNRSHIK HGTGDKHGVV SGVPAPWEKN 1200
LTNVEWEDRS GGNFCRSCPS KLHNYSTTVT GQNSGRQACI RCEACKKAGN LYDISEDNSL 1260
QELDQPAAPV AVTSNASTTK YPQSPTNSKA QKKNRNKLRR QHSYDTFVDL QKEEAALAPR 1320
SVSLKDKGRF MDGSPYAHMF EMSAGESTFA NNKSSVPTAG HHHHNNPGGG YMLSKSLYPD 1380
RVTQNPFIPT FGDDQCLLHG SKSYFFRQPT VAGASKARPD FRALVTNKPV VSALHGAVPA 1440
RFQKDICIGN QSNPCVPNNK NPRAFNGSSN GHVYEKLSSI ESDV 1484 
Gene Ontology
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0009986; C:cell surface; ISS:BHF-UCL.
 GO:0017146; C:N-methyl-D-aspartate selective glutamate receptor complex; IDA:UniProtKB.
 GO:0043005; C:neuron projection; ISS:BHF-UCL.
 GO:0030288; C:outer membrane-bounded periplasmic space; IEA:InterPro.
 GO:0014069; C:postsynaptic density; IEA:Compara.
 GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
 GO:0008021; C:synaptic vesicle; IEA:Compara.
 GO:0005262; F:calcium channel activity; IEA:Compara.
 GO:0005234; F:extracellular-glutamate-gated ion channel activity; IEA:InterPro.
 GO:0016594; F:glycine binding; IDA:UniProtKB.
 GO:0004972; F:N-methyl-D-aspartate selective glutamate receptor activity; TAS:ProtInc.
 GO:0008270; F:zinc ion binding; ISS:UniProtKB.
 GO:0001662; P:behavioral fear response; IEA:Compara.
 GO:0048266; P:behavioral response to pain; IEA:Compara.
 GO:0050966; P:detection of mechanical stimulus involved in sensory perception of pain; IEA:Compara.
 GO:0001701; P:in utero embryonic development; IEA:Compara.
 GO:0007612; P:learning; IEA:Compara.
 GO:0007611; P:learning or memory; TAS:ProtInc.
 GO:0007613; P:memory; IEA:Compara.
 GO:0060079; P:regulation of excitatory postsynaptic membrane potential; IEA:Compara.
 GO:0048167; P:regulation of synaptic plasticity; IEA:Compara.
 GO:0045471; P:response to ethanol; IDA:UniProtKB.
 GO:0007423; P:sensory organ development; IEA:Compara.
 GO:0001964; P:startle response; IEA:Compara.
 GO:0001967; P:suckling behavior; IEA:Compara.
 GO:0007268; P:synaptic transmission; TAS:Reactome. 
Interpro
 IPR001828; ANF_lig-bd_rcpt.
 IPR019594; Glu_rcpt_Glu/Gly-bd.
 IPR001320; Iontro_glu_rcpt.
 IPR001508; NMDA_rcpt.
 IPR018884; NMDAR2_C.
 IPR001638; SBP_bac_3. 
Pfam
 PF01094; ANF_receptor
 PF00060; Lig_chan
 PF10565; NMDAR2_C
 PF00497; SBP_bac_3 
SMART
 SM00918; Lig_chan-Glu_bd
 SM00079; PBPe 
PROSITE
  
PRINTS
 PR00177; NMDARECEPTOR.