CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037071
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Nucleosome-remodeling factor subunit BPTF 
Protein Synonyms/Alias
  
Gene Name
 BPTF 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
407NKARGSNKSFLAAANubiquitination[1]
803KAVQMCSKPREFALAubiquitination[1]
909HVYRFVPKLPGNTNVubiquitination[1, 2]
1087KTSTNSSKNLSESPVubiquitination[1, 2]
1411YLKGECLKEISESRVubiquitination[2]
1440IIPENDIKSLTVKESubiquitination[2, 3]
1705FVTKSSKKSIFVLPNubiquitination[1, 2, 3]
1716VLPNDDLKKLARKGGubiquitination[1]
1717LPNDDLKKLARKGGIubiquitination[1]
1735PYFNYNAKPALDIWPubiquitination[2]
1810ITTTEIIKRRDVGPYubiquitination[3]
1893AFAERVEKEKAQAVEubiquitination[1]
1956TKMVLTTKVGSPATVubiquitination[1, 2]
2062LQQSTLGKAIIRTPVubiquitination[2]
2461KLSALLFKHKEQLRAubiquitination[1]
2490IEVQEELKRDLKIKKubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
  
Sequence Annotation
  
Keyword
 Bromodomain; Complete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 2764 AA 
Protein Sequence
MVSEEEEEED GDAEETQDSE DDEEDEMEED DDDSDYPEEM EDDDDDASYC TESSFRSHST 60
YSSTPGRRKP RVHRPRSPIL EEKDIPPLEF PKSSEDLMVP NEHIMNVIAI YEVLRNFGTV 120
LRLSPFRFED FCAALVSQEQ CTLMAEMHVV LLKAVLREED TSNTTFGPAD LKDSVNSTLY 180
FIDGMTWPEV LRVYCESDKE YHHVLPYQEA EDYPYGPVEN KIKVLQFLVD QFLTTNIARE 240
ELMSEGVIQY DDHCRVCHKL GDLLCCETCS AVYHLECVKP PLEEVPEDEW QCEVCVAHKV 300
PGVTDCVAEI QKNKPYIRHE PIGYDRSRRK YWFLNRRLII EEDTENENEK KIWYYSTKVQ 360
LAELIDCLDK DYWEAELCKI LEEMREEIHR HMDITEDLTN KARGSNKSFL AAANEEILES 420
IRAKKGDIDN VKSPEETEKD KNETENDSKD AEKNREEFED QSLEKDSDDK TPDDDPEQGK 480
SEEPTEVGDK GNSVSANLGD NTTNATSEET SPSEGRSPVG CLSETPDSSN MAEKKVASEL 540
PQDVPEEPNK TCESSNTSAT TTSIQPNLEN SNSSSELNSS QSESAKAADD PENGERESHT 600
PVSIQEEIVG DFKSEKSNGE LSESPGAGKG ASGSTRIITR LRNPDSKLSQ LKSQQVAAAA 660
HEANKLFKEG KEVLVVNSQG EISRLSTKKE VIMKGNINNY FKLGQEGKYR VYHNQYSTNS 720
FALNKHQHRE DHDKRRHLAH KFCLTPAGEF KWNGSVHGSK VLTISTLRLT ITQLENNIPS 780
SFLHPNWASH RANWIKAVQM CSKPREFALA LAILECAVKP VVMLPIWRES LGHTRLHRMT 840
SIEREEKEKV KKKEKKQEEE ETMQQATWVK YTFPVKHQVW KQKGEEYRVT GYGGWSWISK 900
THVYRFVPKL PGNTNVNYRK SLEGTKNNMD ENMDESDKRK CSRSPKKIKI EPDSEKDEVK 960
GSDAAKGADQ NEMDISKITE KKDQDVKELL DSDSDKPCKE EPMEVDDDMK TESHVNCQES 1020
SQVDVVNVSE GFHLRTSYKK KTKSSKLDGL LERRIKQFTL EEKQRLEKIK LEGGIKGIGK 1080
TSTNSSKNLS ESPVITKAKE GCQSDSMRQE QSPNANNDQP EDLIQGCSES DSSVLRMSDP 1140
SHTTNKLYPK DRVLDDVSIR SPETKCPKQN SIENDIEEKV SDLASRGQEP SKSKTKGNDF 1200
FIDDSKLASA DDIGTLICKN KKPLIQEESD TIVSSSKSAL HSSVPKSTND RDATPLSRAM 1260
DFEGKLGCDS ESNSTLENSS DTVSIQDSSE EDMIVQNSNE SISEQFRTRE QDVEVLEPLK 1320
CELVSGESTG NCEDRLPVKG TEANGKKPSQ QKKLEERPVN KCSDQIKLKN TTDKKNNENR 1380
ESEKKGQRTS TFQINGKDNK PKIYLKGECL KEISESRVVS GNVEPKVNNI NKIIPENDIK 1440
SLTVKESAIR PFINGDVIME DFNERNSSET KSHLLSSSDA EGNYRDSLET LPSTKESDST 1500
QTTTPSASCP ESNSVNQVED MEIETSEVKK VTSSPITSEE ESNLSNDFID ENGLPINKNE 1560
NVNGESKRKT VITEVTTMTS TVATESKTVI KVEKGDKQTV VSSTENCAKS TVTTTTTTVT 1620
KLSTPSTGGS VDIISVKEQS KTVVTTTVTD SLTTTGGTLV TSMTVSKEYS TRDKVKLMKF 1680
SRPKKTRSGT ALPSYRKFVT KSSKKSIFVL PNDDLKKLAR KGGIREVPYF NYNAKPALDI 1740
WPYPSPRPTF GITWRYRLQT VKSLAGVSLM LRLLWASLRW DDMAAKAPPG GGTTRTETSE 1800
TEITTTEIIK RRDVGPYGIR SEYCIRKIIC PIGVPETPKE TPTPQRKGLR SSALRPKRPE 1860
TPKQTGPVII ETWVAEEELE LWEIRAFAER VEKEKAQAVE QQAKKRLEQQ KPTVIATSTT 1920
SPTSSTTSTI SPAQKVMVAP ISGSVTTGTK MVLTTKVGSP ATVTFQQNKN FHQTFATWVK 1980
QGQSNSGVVQ VQQKVLGIIP SSTGTSQQTF TSFQPRTATV TIRPNTSGSG GTTSNSQVIT 2040
GPQIRPGMTV IRTPLQQSTL GKAIIRTPVM VQPGAPQQVM TQIIRGQPVS TAVSAPNTVS 2100
STPGQKSLTS ATSTSNIQSS ASQPPRPQQG QVKLTMAQLT QLTQGHGGNQ GLTVVIQGQG 2160
QTTGQLQLIP QGVTVLPGPG QQLMQAAMPN GTVQRFLFTP LATTATTAST TTTTVSTTAA 2220
GTGEQRQSKL SPQMQVHQDK TLPPAQSSSV GPAEAQPQTA QPSAQPQPQT QPQSPAQPEV 2280
QTQPEVQTQT TVSSHVPSEA QPTHAQSSKP QVAAQSQPQS NVQGQSPVRV QSPSQTRIRP 2340
STPSQLSPGQ QSQVQTTTSQ PIPIQPHTSL QIPSQGQPQS QPQVVMKHNA VIEHLKQKKS 2400
MTPAEREENQ RMIVCNQVMK YILDKIDKEE KQAAKKRKRE ESVEQKRSKQ NATKLSALLF 2460
KHKEQLRAEI LKKRALLDKD LQIEVQEELK RDLKIKKEKD LMQLAQATAV AAPCPPVTPA 2520
PPAPPAPPPS PPPPPAVQHT GLLSTPTLPA ASQKRKREEE KDSSSKSKKK KMISTTSKET 2580
KKDTKLYCIC KTPYDESKFY IGCDRCQNWY HGRCVGILQS EAELIDEYVC PQCQSTEDAM 2640
TVLTPLTEKD YEGLKRVLRS LQAHKMAWPF LEPVDPNDAP DYYGVIKEPM DLATMEERVQ 2700
RRYYEKLTEF VADMTKIFDN CRYYNPSDSP FYQCAEVLES FFVQKLKGFK ASRSHNNKLQ 2760
STAS 2764 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR001487; Bromodomain.
 IPR018359; Bromodomain_CS.
 IPR004022; DDT_dom.
 IPR018500; DDT_dom_subgr.
 IPR018501; DDT_dom_superfamily.
 IPR019786; Zinc_finger_PHD-type_CS.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF00439; Bromodomain
 PF02791; DDT
 PF00628; PHD 
SMART
 SM00297; BROMO
 SM00571; DDT
 SM00249; PHD 
PROSITE
 PS00633; BROMODOMAIN_1
 PS50014; BROMODOMAIN_2
 PS50827; DDT
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2 
PRINTS
 PR00503; BROMODOMAIN.