CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004991
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Lamin-B2 
Protein Synonyms/Alias
  
Gene Name
 Lmnb2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
59LLLRISEKEEVTTREubiquitination[1]
101RLQIEIGKVQAELEEubiquitination[1]
115EARKSAKKREGELTVubiquitination[1]
128TVAQGRVKDLESLFHubiquitination[1]
148LATALSDKQGLETEVubiquitination[1]
164ELRAQLAKAEDGHAVubiquitination[1]
173EDGHAVAKKQLEKETacetylation[2]
233RQQEYDFKMAQALEDubiquitination[1]
263LEQTYQAKLDNAKLLubiquitination[1]
268QAKLDNAKLLSDQNDubiquitination[1]
276LLSDQNDKAAHAAREubiquitination[1]
329GERDKFRKMLDAKEQubiquitination[1]
470RLKNSSDKDQSLGNWubiquitination[1]
496IAYKFTPKYVLRAGQubiquitination[1]
551DGEEVAVKAAKHSSVubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654
Functional Description
 Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. 
Sequence Annotation
 REGION 1 26 Head.
 REGION 27 378 Rod.
 REGION 27 61 Coil 1A.
 REGION 62 73 Linker 1.
 REGION 74 207 Coil 1B.
 REGION 208 234 Linker 2.
 REGION 235 378 Coil 2.
 REGION 379 596 Tail.
 MOTIF 415 420 Nuclear localization signal (Potential).
 MOD_RES 12 12 Phosphothreonine (By similarity).
 MOD_RES 15 15 Phosphoserine (By similarity).
 MOD_RES 59 59 N6-acetyllysine (By similarity).
 MOD_RES 398 398 Phosphoserine (By similarity).
 MOD_RES 400 400 Phosphoserine (By similarity).
 MOD_RES 427 427 Phosphoserine.
 MOD_RES 494 494 Phosphothreonine.
 MOD_RES 593 593 Cysteine methyl ester (By similarity).
 LIPID 593 593 S-farnesyl cysteine (By similarity).  
Keyword
 Acetylation; Alternative splicing; Coiled coil; Complete proteome; Direct protein sequencing; Intermediate filament; Lipoprotein; Membrane; Methylation; Nucleus; Phosphoprotein; Prenylation; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 596 AA 
Protein Sequence
MASLPPHAGP ATPLSPTRLS RLQEKEELRE LNDRLAHYID RVRALELEND RLLLRISEKE 60
EVTTREVSGI KTLYESELAD ARRVLDETAR ERARLQIEIG KVQAELEEAR KSAKKREGEL 120
TVAQGRVKDL ESLFHRSEAE LATALSDKQG LETEVAELRA QLAKAEDGHA VAKKQLEKET 180
LMRVDLENRC QSLQEELAFS KSVFEEEVRE TRRRHERRLV EVDSSRQQEY DFKMAQALED 240
LRSQHDEQVR LYRVELEQTY QAKLDNAKLL SDQNDKAAHA AREELKEARM RVESLSYQLL 300
GLQKQASAAE NHIHELEEAL AGERDKFRKM LDAKEQEMTE VRDAMQQQLA EYQELLDIKL 360
ALDMEISAYR KLLEGEEERL KLSPSPSSRI TISRATSSSS SSSGVGMSVG QGRGKRRRLE 420
TEDTSGSPSR ASRVSSGSRL AQQTVATGVV NIDEVDPEGR FVRLKNSSDK DQSLGNWRIK 480
RQVLEGEDIA YKFTPKYVLR AGQTVTVWAA GAGATHSPPS TLVWKSQTNW GPGESFRTAL 540
VSADGEEVAV KAAKHSSVQG RENGEEEEEE EAEFGEEDLF HQQGDPRTTS RGCRLM 596 
Gene Ontology
 GO:0005638; C:lamin filament; IDA:MGI.
 GO:0005635; C:nuclear envelope; IDA:MGI.
 GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.
 GO:0005198; F:structural molecule activity; IEA:InterPro. 
Interpro
 IPR016044; F.
 IPR001664; IF.
 IPR018039; Intermediate_filament_CS.
 IPR001322; Lamin_tail_dom. 
Pfam
 PF00038; Filament
 PF00932; LTD 
SMART
  
PROSITE
 PS00226; IF 
PRINTS