CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-045555
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein LOC100910446 
Protein Synonyms/Alias
  
Gene Name
 LOC100910446 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
46QYTNQLAKETDKYIKubiquitination[1]
50QLAKETDKYIKEFGFacetylation[2]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Coiled coil; Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 245 AA 
Protein Sequence
CNHSLISITI AAEIQRTLNQ LGTPQDTPEL RQQLQQEQQY TNQLAKETDK YIKEFGFLPT 60
TPSEQRQRKI QKDRLVAEFT TALTNFQKVQ RQAAEREKEF VARVRASSRV SVGTGGFPED 120
SSKEKNFVSW ESQTQPQVQV QDEEITEDDL RLIHERESSI RQLEADIMDI NEIFKDLGMM 180
IHEQGDVIDS IEANVESAEV HVQQANQQLS RAANYQRKSR KTLCIIILIL VVGIVIIFFI 240
VWGLK 245 
Gene Ontology
 GO:0016020; C:membrane; IEA:InterPro.
 GO:0006886; P:intracellular protein transport; IEA:InterPro.
 GO:0016192; P:vesicle-mediated transport; IEA:InterPro. 
Interpro
 IPR006012; Syntaxin/epimorphin_CS.
 IPR006011; Syntaxin_N.
 IPR010989; t-SNARE.
 IPR000727; T_SNARE_dom. 
Pfam
 PF05739; SNARE 
SMART
 SM00503; SynN
 SM00397; t_SNARE 
PROSITE
 PS00914; SYNTAXIN
 PS50192; T_SNARE 
PRINTS