CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007285
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Superoxide dismutase 1 copper chaperone 
Protein Synonyms/Alias
  
Gene Name
 CCS1 
Gene Synonyms/Alias
 LYS7; YMR038C; YM9532.03C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
66NTLRNCGKDAIIRGAubiquitination[1]
141HEKGDVSKGVESTGKubiquitination[1]
167FNESDLGKNLYSGKTubiquitination[1]
226AGVWENNKQVCACTGubiquitination[1]
241KTVWEERKDALANNIubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Copper chaperone for apo superoxide dismutase 1 (SOD1). Binds copper ions and delivers them specifically to apo-SOD1. 
Sequence Annotation
 DOMAIN 7 70 HMA.
 METAL 16 16 Zinc; shared with apo-SOD1.
 METAL 17 17 Copper 1 (By similarity).
 METAL 20 20 Copper 1 (By similarity).
 METAL 229 229 Copper 2 (By similarity).
 METAL 231 231 Copper 2 (By similarity).
 DISULFID 27 64
 DISULFID 229 229 Interchain (with C-58 in apo-SOD1).  
Keyword
 3D-structure; Chaperone; Complete proteome; Copper; Cytoplasm; Disulfide bond; Metal-binding; Mitochondrion; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 249 AA 
Protein Sequence
MTTNDTYEAT YAIPMHCENC VNDIKACLKN VPGINSLNFD IEQQIMSVES SVAPSTIINT 60
LRNCGKDAII RGAGKPNSSA VAILETFQKY TIDQKKDTAV RGLARIVQVG ENKTLFDITV 120
NGVPEAGNYH ASIHEKGDVS KGVESTGKVW HKFDEPIECF NESDLGKNLY SGKTFLSAPL 180
PTWQLIGRSF VISKSLNHPE NEPSSVKDYS FLGVIARSAG VWENNKQVCA CTGKTVWEER 240
KDALANNIK 249 
Gene Ontology
 GO:0005829; C:cytosol; IDA:SGD.
 GO:0005743; C:mitochondrial inner membrane; IDA:SGD.
 GO:0005758; C:mitochondrial intermembrane space; TAS:Reactome.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0016532; F:superoxide dismutase copper chaperone activity; IMP:SGD.
 GO:0008270; F:zinc ion binding; IBA:RefGenome.
 GO:0015680; P:intracellular copper ion transport; IMP:SGD.
 GO:0055114; P:oxidation-reduction process; IEA:InterPro.
 GO:0019430; P:removal of superoxide radicals; IBA:RefGenome. 
Interpro
 IPR006121; HeavyMe-assoc_HMA.
 IPR024134; SOD_Cu/Zn_/chaperones.
 IPR024142; SOD_Cu_chaperone.
 IPR001424; SOD_Cu_Zn_dom. 
Pfam
 PF00403; HMA
 PF00080; Sod_Cu 
SMART
  
PROSITE
 PS01047; HMA_1
 PS50846; HMA_2 
PRINTS