CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009718
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Phosphoheptose isomerase 
Protein Synonyms/Alias
 Sedoheptulose 7-phosphate isomerase 
Gene Name
 gmhA 
Gene Synonyms/Alias
 lpcA; tfrA; yafI; b0222; JW0212 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
22ETLANFLKDDANIHAacetylation[1, 2]
140AAREKGMKVITLTGKacetylation[2]
147KVITLTGKDGGKMAGacetylation[2]
151LTGKDGGKMAGTADIacetylation[2]
Reference
 [1] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [2] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. 
Sequence Annotation
 DOMAIN 37 192 SIS.
 REGION 54 55 Substrate binding.
 REGION 93 94 Substrate binding (By similarity).
 REGION 119 121 Substrate binding (By similarity).
 METAL 61 61 Zinc (By similarity).
 METAL 65 65 Zinc (By similarity).
 METAL 172 172 Zinc (By similarity).
 METAL 180 180 Zinc (By similarity).
 BINDING 61 61 Substrate.
 BINDING 65 65 Substrate (By similarity).
 BINDING 120 120 Substrate.
 BINDING 124 124 Substrate (By similarity).
 BINDING 169 169 Substrate.
 BINDING 172 172 Substrate.
 BINDING 180 180 Substrate.  
Keyword
 3D-structure; Carbohydrate metabolism; Complete proteome; Cytoplasm; Isomerase; Lipopolysaccharide biosynthesis; Metal-binding; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 192 AA 
Protein Sequence
MYQDLIRNEL NEAAETLANF LKDDANIHAI QRAAVLLADS FKAGGKVLSC GNGGSHCDAM 60
HFAEELTGRY RENRPGYPAI AISDVSHISC VGNDFGFNDI FSRYVEAVGR EGDVLLGIST 120
SGNSANVIKA IAAAREKGMK VITLTGKDGG KMAGTADIEI RVPHFGYADR IQEIHIKVIH 180
ILIQLIEKEM VK 192 
Gene Ontology
 GO:0005737; C:cytoplasm; ISS:EcoCyc.
 GO:0030246; F:carbohydrate binding; IEA:InterPro.
 GO:0008968; F:D-sedoheptulose 7-phosphate isomerase activity; IDA:EcoCyc.
 GO:0008270; F:zinc ion binding; IEA:HAMAP.
 GO:2001061; P:D-glycero-D-manno-heptose 7-phosphate biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0009244; P:lipopolysaccharide core region biosynthetic process; IMP:EcoCyc. 
Interpro
 IPR004515; Phosphoheptose_Isoase.
 IPR001347; SIS. 
Pfam
 PF13580; SIS_2 
SMART
  
PROSITE
 PS51464; SIS 
PRINTS