CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000220
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S9-A 
Protein Synonyms/Alias
 RP21; S13; YP28; YS11 
Gene Name
 RPS9A 
Gene Synonyms/Alias
 RPS13A; YS11A; YPL081W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
10RAPRTYSKTYSTPKRacetylation[1]
10RAPRTYSKTYSTPKRubiquitination[2]
16SKTYSTPKRPYESSRacetylation[1]
29SRLDAELKLAGEFGLubiquitination[2]
37LAGEFGLKNKKEIYRacetylation[1]
51RISFQLSKIRRAARDacetylation[1]
90VGVLSEDKKKLDYVLacetylation[1]
92VLSEDKKKLDYVLALacetylation[1]
92VLSEDKKKLDYVLALubiquitination[2]
115RLQTQVYKLGLAKSVacetylation[1]
120VYKLGLAKSVHHARVacetylation[1]
120VYKLGLAKSVHHARVubiquitination[2]
138QRHIAVGKQIVNIPSacetylation[1]
138QRHIAVGKQIVNIPSubiquitination[2]
154MVRLDSEKHIDFAPTacetylation[1]
154MVRLDSEKHIDFAPTubiquitination[2]
180ARRNAARKAEASGEAubiquitination[2]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. 
Sequence Annotation
 DOMAIN 107 181 S4 RNA-binding.
 MOD_RES 184 184 Phosphoserine (By similarity).  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein; Ribosome biogenesis; RNA-binding; rRNA processing; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 197 AA 
Protein Sequence
MPRAPRTYSK TYSTPKRPYE SSRLDAELKL AGEFGLKNKK EIYRISFQLS KIRRAARDLL 60
TRDEKDPKRL FEGNALIRRL VRVGVLSEDK KKLDYVLALK VEDFLERRLQ TQVYKLGLAK 120
SVHHARVLIT QRHIAVGKQI VNIPSFMVRL DSEKHIDFAP TSPFGGARPG RVARRNAARK 180
AEASGEAADE ADEADEE 197 
Gene Ontology
 GO:0030686; C:90S preribosome; IDA:SGD.
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
 GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
 GO:0032040; C:small-subunit processome; IDA:SGD.
 GO:0019843; F:rRNA binding; IMP:SGD.
 GO:0003735; F:structural constituent of ribosome; IDA:SGD.
 GO:0002181; P:cytoplasmic translation; IC:SGD.
 GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IGI:SGD. 
Interpro
 IPR022801; Ribosomal_S4/S9.
 IPR005710; Ribosomal_S4/S9_euk/arc.
 IPR001912; Ribosomal_S4/S9_N.
 IPR018079; Ribosomal_S4_CS.
 IPR002942; S4_RNA-bd. 
Pfam
 PF00163; Ribosomal_S4
 PF01479; S4 
SMART
 SM00363; S4 
PROSITE
 PS00632; RIBOSOMAL_S4
 PS50889; S4 
PRINTS