CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008744
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pre-rRNA-processing protein ESF2 
Protein Synonyms/Alias
 18S rRNA factor 2 
Gene Name
 ESF2 
Gene Synonyms/Alias
 ABT1; YNR054C; N3491 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
34TKKKISSKDDIFSKKacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Involved in the small subunit (SSU) processome assembly and function, and in the 18S rRNA synthesis. Required for the early cleavages at sites A0, A1 and A2. Stimulates DBP8 RNA helicase ATPase activity. 
Sequence Annotation
 DOMAIN 114 204 RRM.
 MOD_RES 7 7 Phosphoserine.
 MOD_RES 13 13 Phosphoserine.
 MOD_RES 14 14 Phosphoserine.  
Keyword
 Complete proteome; Nucleus; Phosphoprotein; Reference proteome; Ribosome biogenesis; RNA-binding; rRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 316 AA 
Protein Sequence
MSEKVNSDFE DFSSDEETDQ HNVLIQTKKK ISSKDDIFSK KVEDIESENE SDIEEEQKQE 60
EKEDVEQPDK ENGEKLDREV EEQASSTTSL DLKTEKLRQL VKSKAAKKSK HKTGVVYFSS 120
IPPYMKPAKM RQILTRFGEV DRLFLKKEDD QKYKQRVKGG GNKKNKYEEG WAEFIRKRDA 180
KLCAETLNGN IIGGKKGTFY HDDILNVKYL PGFKWADLTE QIARENDIRQ AKLEMEISQA 240
NKLNAEFIRN VEQSKMIQNI KNSRKRAGKE GESADSHPHR EFKQRRVETS RANAPSDIKQ 300
QSSGSKDLGN VLTNLL 316 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005730; C:nucleolus; IDA:SGD.
 GO:0001671; F:ATPase activator activity; IDA:SGD.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IDA:SGD.
 GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
 GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
 GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
 GO:0034462; P:small-subunit processome assembly; IMP:SGD. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait. 
Pfam
  
SMART
  
PROSITE
 PS50102; RRM 
PRINTS