CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-043256
UniProt Accession
H3BME4_HUMAN
;
H3BME4
Genbank Protein ID
Z84479
;
Z98881
;
Z98883
Genbank Nucleotide ID
Protein Name
Ras-related protein Rab-40C
Protein Synonyms/Alias
Gene Name
RAB40C
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Lysine Modification
Position
Peptide
Type
References
133
NRLHLAF
K
RQVPTEQ
ubiquitination
[1]
Reference
[1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [
PMID: 21890473
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; GTP-binding; Nucleotide-binding; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
157 AA
Protein Sequence
MGSQGSPVKS YDYLLKFLLV GDSDVGKGEI LESLQDGAAE SPYAYSNGID YKTTTILLDG 60
RRVKLELWDT SGQGRFCTIF RSYSRGAQGI LLVYDITNRW SFDGIDRWIK EIDEHAPGVP 120
RILVGNRLHL AFKRQVPTEQ ARAYAEKNCM TFFEVSP 157
Gene Ontology
GO:0048471
; C:perinuclear region of cytoplasm; IEA:Compara.
GO:0019003
; F:GDP binding; IEA:Compara.
GO:0005525
; F:GTP binding; IEA:UniProtKB-KW.
GO:0015031
; P:protein transport; IEA:InterPro.
GO:0007264
; P:small GTPase mediated signal transduction; IEA:InterPro.
Interpro
IPR027417
; P-loop_NTPase.
IPR005225
; Small_GTP-bd_dom.
IPR001806
; Small_GTPase.
IPR003579
; Small_GTPase_Rab_type.
Pfam
PF00071
; Ras
SMART
SM00175
; RAB
PROSITE
PRINTS
PR00449
; RASTRNSFRMNG.