CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000326
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ubiquitin/ISG15-conjugating enzyme E2 L6 
Protein Synonyms/Alias
 Retinoic acid-induced gene B protein; RIG-B; UbcH8; Ubiquitin carrier protein L6; Ubiquitin-protein ligase L6 
Gene Name
 UBE2L6 
Gene Synonyms/Alias
 UBCH8 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
9MASMRVVKELEDLQKubiquitination[1]
16KELEDLQKKPPPYLRubiquitination[1]
138QNPELFRKNAEEFTLubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Catalyzes the covalent attachment of ubiquitin or ISG15 to other proteins. Functions in the E6/E6-AP-induced ubiquitination of p53/TP53. Promotes ubiquitination and subsequent proteasomal degradation of FLT3. 
Sequence Annotation
 ACT_SITE 86 86 Glycyl thioester intermediate (By  
Keyword
 3D-structure; Alternative splicing; Complete proteome; Direct protein sequencing; Ligase; Reference proteome; Ubl conjugation; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 153 AA 
Protein Sequence
MMASMRVVKE LEDLQKKPPP YLRNLSSDDA NVLVWHALLL PDQPPYHLKA FNLRISFPPE 60
YPFKPPMIKF TTKIYHPNVD ENGQICLPII SSENWKPCTK TCQVLEALNV LVNRPNIREP 120
LRMDLADLLT QNPELFRKNA EEFTLRFGVD RPS 153 
Gene Ontology
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0042296; F:ISG15 ligase activity; IEA:Compara.
 GO:0004842; F:ubiquitin-protein ligase activity; TAS:ProtInc.
 GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.
 GO:0045087; P:innate immune response; TAS:Reactome.
 GO:0032020; P:ISG15-protein conjugation; IEA:Compara.
 GO:0019941; P:modification-dependent protein catabolic process; IEA:Compara.
 GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome. 
Interpro
 IPR000608; UBQ-conjugat_E2.
 IPR023313; UBQ-conjugating_AS.
 IPR016135; UBQ-conjugating_enzyme/RWD. 
Pfam
 PF00179; UQ_con 
SMART
  
PROSITE
 PS00183; UBIQUITIN_CONJUGAT_1
 PS50127; UBIQUITIN_CONJUGAT_2 
PRINTS