CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-025830
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA-repair protein complementing XP-G cells variant 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
489TLFHRLCKLLFFRIRubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
  
Sequence Annotation
  
Keyword
 Nucleus. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1611 AA 
Protein Sequence
QGAVKSFCTS ASGAPLGPKG DGHYPWSCPV THTREKIYAI CSDYAFLNQA TSIYKTPNPS 60
RSPCLPDSTS LSAGNNSSRY IGIPTSTSEI IYNEENSLEN LSNSLGKLPL AWEIDKSEFD 120
GVTTNSKHKS GNAKKQVSKR KTSDKKGRYQ KECPQHSPLE DIKQRKVLDL RRWYCISRPQ 180
YKTSCGISSL ISCWNFLYST MGAGNLPPIT QEEALHILGF QPPFEDIRFG PFTGNTTLMR 240
WFRQINDHFH VKGCSYVLYK PHGKNKTAGE TASGALSKLT RGLKDESLAY IYHCQNHYFC 300
PIGFEATPVK ANKAFSRGPL SPQEVEYWIL IGESSRKHPA IHCKKWADIV TDLNTQNPEY 360
LDIRHLERGL QYRKTKKVGG NLHCIIAFQR LNWQRFGLWN FPFGTIRQES QPPTHAQGIA 420
KSESEDNISK KQHGRLGRSF SASFHQDSAW KKMSNISIWL NQALKGVRDR HGNSIENPHL 480
LTLFHRLCKL LFFRIRPIFV FDGDAPLLKK QTLVKRRQRK DLASSDSRKT TEKLLKTFLK 540
RQAIKTAFRS KRDEALPSLT QVRRENDLYV LPPLQEEEKH SSEEEDEKEW QERMNQKQAL 600
QEEFFHNPQA IDIESEDFSS LPPEVKHEIL TDMKEFTKRR RTLFEAMPEE SDDFSQYQLK 660
GLLKKNYLNQ HIEHVQKEMN QQHSGHIRRQ YEDEGGFLKE VESRRVVSED TSHYILIKGI 720
QAKTVAEVDS ESLPSSSKMH GMSFDVKSSP CEKLKTEKEP DATPPSPRTL LAMQAALLGS 780
SSEEELESEN RRQARGRNAP AAVDEGSISP RTLSAIKRAL DDDEDVKVCA GDDVQTGGPG 840
AEEMRINSST ENSDEGLKVR DGKGIPFTAT LASSSVNSAE EHVASTNEGR EPTDSVPKEQ 900
MSLVHVGTEA FPISDESMIK DRKDRLPLES AVVRHSDAPG LPNGRELTPA SPTCTNSVSK 960
NETHAEVLEQ QNELCPYESK FDSSLLSSDD ETKCKPNSAS EVIGPVSLQE TSSIVSVPSE 1020
AVDNVENVVS FNAKEHENFL ETIQEQQTTE SAGQDLISIP KAVEPMEIDS EESESDGSFI 1080
EVQSVISDEE LQAEFPETSK PPSEQGEEEL VGTREGEAPA ESESLLRDNS ERDDVDGEPQ 1140
EAEKDAEDSL HEWQDINLEE LETLESNLLA QQNSLKAQKQ QQERIAATVT GQMFLESQEL 1200
LRLFGIPYIQ APMEAEAQCA ILDLTDQTSG TITDDSDIWL FGARHVYRNF FNKNKFVEYY 1260
QYVDFHNQLG LDRNKLINLA YLLGSDYTEG IPTVGCVTAM EILNEFPGHG LEPLLKFSEW 1320
WHEAQKNPKI RPNPHDTKVK KKLRTLQLTP GFPNPAVAEA YLKPVVDDSK GSFLWGKPDL 1380
DKIREFCQRY FGWNRTKTDE SLFPVLKQLD AQQTQLRIDS FFRLAQQEKE DAKRIKSQRL 1440
NRAVTCMLRK EKEAAASEIE AVSVAMEKEF ELLDKAKRKT QKRGITNTLE ESSSLKRKRL 1500
SDSKRKNTCG GFLGETCLSE SSDGSSSEHA ESSSLMNVQR RTAAKEPKTS ASDSQNSVKE 1560
APVKNGGATT SSSSDSDDDG GKEKMVLVTA RSVFGKKRRK LRRARGRKRK T 1611 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0004519; F:endonuclease activity; IEA:InterPro.
 GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
 GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IEA:GOC.
 GO:0006289; P:nucleotide-excision repair; IEA:InterPro. 
Interpro
 IPR020045; 5-3_exonuclease_C.
 IPR008918; HhH2.
 IPR006086; XPG-I_dom.
 IPR006084; XPG/Rad2.
 IPR001044; XPG/Rad2_eukaryotes.
 IPR019974; XPG_CS.
 IPR006085; XPG_DNA_repair_N. 
Pfam
 PF00867; XPG_I
 PF00752; XPG_N 
SMART
 SM00279; HhH2
 SM00484; XPGI
 SM00485; XPGN 
PROSITE
 PS00841; XPG_1
 PS00842; XPG_2 
PRINTS
 PR00853; XPGRADSUPER.
 PR00066; XRODRMPGMNTG.