CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007840
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein YhgF 
Protein Synonyms/Alias
  
Gene Name
 yhgF 
Gene Synonyms/Alias
 b3407; JW3370 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
75ERRQAILKSISEQGKacetylation[1]
82KSISEQGKLTDDLAKacetylation[1]
89KLTDDLAKAINATLSacetylation[1]
108EDLYLPYKPKRRTRGacetylation[1]
110LYLPYKPKRRTRGQIacetylation[1]
156DKGVADTKAALDGARacetylation[1]
179EDAALLAKVRDYLWKacetylation[1]
198VSTVVSGKEEEGAKFacetylation[1]
204GKEEEGAKFRDYFDHacetylation[1]
350AVVDATGKLVATDTIacetylation[1]
403RFYLDVQKQFPKVTAacetylation[1]
463ELVKIDPKSIGVGQYacetylation[1]
588AATQQALKDLMGNSSacetylation[1]
609ASDFTDEKFGVPTVTacetylation[1]
620PTVTDIIKELEKPGRacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618] 
Functional Description
  
Sequence Annotation
 DOMAIN 651 720 S1 motif.  
Keyword
 Complete proteome; Reference proteome; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 773 AA 
Protein Sequence
MMNDSFCRII AGEIQARPEQ VDAAVRLLDE GNTVPFIARY RKEITGGLDD TQLRNLETRL 60
SYLRELEERR QAILKSISEQ GKLTDDLAKA INATLSKTEL EDLYLPYKPK RRTRGQIAIE 120
AGLEPLADLL WSDPSHTPEV AAAQYVYADK GVADTKAALD GARYILMERF AEDAALLAKV 180
RDYLWKNAHL VSTVVSGKEE EGAKFRDYFD HHEPLSTVPS HRALAMFRGR NEGVLQLSLN 240
ADPQFDEPPK ESYCEQIIMD HLGLRLNNAP ADSWRKGVVS WTWRIKVLMH LETELMGTVR 300
ERAEDEAINV FARNLHDLLM AAPAGLRATM GLDPGLRTGV KVAVVDATGK LVATDTIYPH 360
TGQAAKAAMT VAALCEKHNV ELVAIGNGTA SRETERFYLD VQKQFPKVTA QKVIVSEAGA 420
SVYSASELAA QEFPDLDVSL RGAVSIARRL QDPLAELVKI DPKSIGVGQY QHDVSQTQLA 480
RKLDAVVEDC VNAVGVDLNT ASVPLLTRVA GLTRMMAQNI VAWRDENGQF QNRQQLLKVS 540
RLGPKAFEQC AGFLRINHGD NPLDASTVHP EAYPVVERIL AATQQALKDL MGNSSELRNL 600
KASDFTDEKF GVPTVTDIIK ELEKPGRDPR PEFKTAQFAD GVETMNDLQP GMILEGAVTN 660
VTNFGAFVDI GVHQDGLVHI SSLSNKFVED PHTVVKAGDI VKVKVLEVDL QRKRIALTMR 720
LDEQPGETNA RRGGGNERPQ NNRPAAKPRG REAQPAGNSA MMDALAAAMG KKR 773 
Gene Ontology
 GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR003029; Rbsml_prot_S1_RNA-bd_dom.
 IPR022967; RNA-binding_domain_S1.
 IPR023323; Tex-like_dom.
 IPR023319; Tex-like_HTH_dom.
 IPR018974; Tex-like_N.
 IPR023097; Tex_RuvX-like_dom.
 IPR006641; YqgF/RNaseH-like_dom. 
Pfam
 PF00575; S1
 PF09371; Tex_N 
SMART
 SM00316; S1
 SM00732; YqgFc 
PROSITE
 PS50126; S1 
PRINTS