CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-042926
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 F-box only protein 21 
Protein Synonyms/Alias
  
Gene Name
 FBXO21 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
18QSSGKVWKEQFRVRWubiquitination[1]
45VNWLEEYKVRQKAGLubiquitination[2, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 505 AA 
Protein Sequence
XTCRRLRELC QSSGKVWKEQ FRVRWPSLMK HYSPTDYVNW LEEYKVRQKA GLEARKIVAS 60
FSKRFFSEHV PCNGFSDIEN LEGPEIFFED ELVCILNMEG RKALTWKYYA KKILYYLRQQ 120
KILNNLKAFL QQPDDYESYL EGAVYIDQYC NPLSDISLKD IQAQIDSIVE LVCKTLRGIN 180
SRHPSLAFKA GESSMIMEIE LQSQVLDAMN YVLYDQLKFK GNRMDYYNAL NLYMHQVLIR 240
RTGIPISMSL LYLTIARQLG VPLEPVNFPS HFLLRWCQGA EGEGIDQSYQ LLRDSLDLYL 300
AMYPDQVQLL LLQARLYFHL GIWPEKVLDI LQHIQTLDPG QHGAVGYLVQ HTLEHIERKK 360
EEVGVEVKLR SDEKHRDVCY SIGLIMKHKR YGYNCVIYGW DPTCMMGHEW IRNMNVHSLP 420
HGHHQPFYNV LVEDGSCRYA AQENLEYNVE PQEISHPDVG RYFSEFTGTH YIPNAELEIR 480
YPEDLEFVYE TVQNIYSAKK ENIDE 505 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:InterPro. 
Interpro
 IPR011722; Hemimethylated_DNA-bd_dom. 
Pfam
 PF08755; YccV-like 
SMART
 SM00992; YccV-like 
PROSITE
  
PRINTS