CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-039561
UniProt Accession
F5GWJ1_HUMAN
;
F5GWJ1
Genbank Protein ID
AC097716
;
AC098595
;
AC107394
;
AC110766
;
AC112239
Genbank Nucleotide ID
Protein Name
Protocadherin-7
Protein Synonyms/Alias
Gene Name
PCDH7
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Lysine Modification
Position
Peptide
Type
References
970
RYDSVNE
K
LSDSPSM
ubiquitination
[1]
Reference
[1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
Nature. 2013 Apr 18;496(7445):372-6. [
PMID: 23503661
]
Functional Description
Sequence Annotation
Keyword
Calcium; Cell adhesion; Complete proteome; Membrane; Reference proteome; Repeat; Transmembrane; Transmembrane helix.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
1255 AA
Protein Sequence
MLRMRTAGWA RGWCLGCCLL LPLSLSLAAA KQLLRYRLAE EGPADVRIGN VASDLGIVTG 60
SGEVTFSLES GSEYLKIDNL TGELSTSERR IDREKLPQCQ MIFDENECFL DFEVSVIGPS 120
QSWVDLFEGQ VIVLDINDNT PTFPSPVLTL TVEENRPVGT LYLLPTATDR DFGRNGIERY 180
ELLQEPGGGG SGGESRRAGA ADSAPYPGGG GNGASGGGSG GSKRRLDASE GGGGTNPGGR 240
SSVFELQVAD TPDGEKQPQL IVKGALDREQ RDSYELTLRV RDGGDPPRSS QAILRVLITD 300
VNDNSPRFEK SVYEADLAEN SAPGTPILQL RAADLDVGVN GQIEYVFGAA TESVRRLLRL 360
DETSGWLSVL HRIDREEVNQ LRFTVMARDR GQPPKTDKAT VVLNIKDEND NVPSIEIRKI 420
GRIPLKDGVA NVAEDVLVDT PIALVQVSDR DQGENGVVTC TVVGDVPFQL KPASDTEGDQ 480
NKKKYFLHTS TPLDYEATRE FNVVIVAVDS GSPSLSSNNS LIVKVGDTND NPPMFGQSVV 540
EVYFPENNIP GERVATVLAT DADSGKNAEI AYSLDSSVMG IFAIDPDSGD ILVNTVLDRE 600
QTDRYEFKVN AKDKGIPVLQ GSTTVIVQVA DKNDNDPKFM QDVFTFYVKE NLQPNSPVGM 660
VTVMDADKGR NAEMSLYIEE NNNIFSIEND TGTIYSTMSF DREHQTTYTF RVKAVDGGDP 720
PRSATATVSL FVMDENDNAP TVTLPKNISY TLLPPSSNVR TVVATVLATD SDDGINADLN 780
YSIVGGNPFK LFEIDPTSGV VSLVGKLTQK HYGLHRLVVQ VNDSGQPSQS TTTLVHVFVN 840
ESVSNATAID SQIARSLHIP LTQDIAGDPS YEISKQRLSI VIGVVAGIMT VILIILIVVM 900
ARYCRSKNKN GYEAGKKDHE DFFTPQQHDK SKKPKKDKKN KKSKQPLYSS IVTVEASKPN 960
GQRYDSVNEK LSDSPSMGRY RSVNGGPGSP DLARHYKSSS PLPTVQLHPQ SPTAGKKHQA 1020
VQDLPPANTF VGAGDNISIG SDHCSEYSCQ TNNKYSKQPF RRVTFSVVSQ PQDPHQGSLQ 1080
SCYDSGLEES ETPSSKSSSG PRLGALPLPE DNYERTTPDG SVGEAEHMEN DSRPLPDVAL 1140
TGKCTRECDE YGHSDSCWMP VRTSPERKKS QPKLSTFMPV DERGSQEKLA NGEAAIMGDR 1200
NRNLLNKKLT SSYETFSAAS FSKNEEANPE DIPLTKTGEY KPSPVNTLTR REVYL 1255
Gene Ontology
GO:0016021
; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005886
; C:plasma membrane; IEA:InterPro.
GO:0005509
; F:calcium ion binding; IEA:InterPro.
GO:0007156
; P:homophilic cell adhesion; IEA:InterPro.
Interpro
IPR002126
; Cadherin.
IPR015919
; Cadherin-like.
IPR020894
; Cadherin_CS.
IPR013164
; Cadherin_N.
IPR013585
; Protocadherin.
Pfam
PF00028
; Cadherin
PF08266
; Cadherin_2
PF08374
; Protocadherin
SMART
SM00112
; CA
PROSITE
PS00232
; CADHERIN_1
PS50268
; CADHERIN_2
PRINTS
PR00205
; CADHERIN.