CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-020973
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DDB1- and CUL4-associated factor 6 
Protein Synonyms/Alias
 IQ motif and WD repeat-containing protein 1; Nuclear receptor interaction protein; NRIP 
Gene Name
 Dcaf6 
Gene Synonyms/Alias
 Iqwd1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
291DDTARELKTPSAEERubiquitination[1]
710FRRRKERKEMEELDTubiquitination[1]
816ESRIFNRKLADEVITubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Ligand-dependent coactivator of nuclear receptors. Enhance transcriptional activity of the nuclear receptors NR3C1 and AR. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex (By similarity). 
Sequence Annotation
 REPEAT 49 88 WD 1.
 REPEAT 92 133 WD 2.
 REPEAT 139 179 WD 3.
 REPEAT 189 229 WD 4.
 REPEAT 251 290 WD 5.
 DOMAIN 692 721 IQ.
 REPEAT 734 772 WD 6.
 REPEAT 775 814 WD 7.
 MOD_RES 336 336 Phosphoserine (By similarity).
 MOD_RES 665 665 Phosphoserine (By similarity).
 MOD_RES 670 670 Phosphothreonine (By similarity).
 MOD_RES 673 673 Phosphoserine.  
Keyword
 Complete proteome; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ubl conjugation pathway; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 876 AA 
Protein Sequence
MARSGSCPHL LWDVRKRSLG LEDPSRLRSR YLGRREFIQR LKLEATLNVH DGCVNTICWN 60
DTGEYILSGS DDTKLVISNP YSRKVLTTIR SGHRANIFSA KFLPCTDDKQ IVSCSGDGVI 120
FYTNIEQDAE TNRQCQFTCH YGTTYEIMTV PNDPYTFLSC GEDGTVRWFD TRIKTSCTKE 180
DCKDDILINC RRAATSVAIC PPVPYYLAVG CSDSSVRIYD RRMLGTRATG NYAGRGTTGM 240
VARFIPSHLS NKSCRVTSLC YSEDGQEILV SYSSDYIYLF DPKDDTAREL KTPSAEERRE 300
ELRQPPVKRL RLRGDWSDTG PRARPESERE RDGEQSPNVS LMQRMSDMLS RWFEEASEVA 360
QSNRGRGRPR PRGGTNQPDV STLPTVPSSP NLEVCETAMD VDMPAALLQP STSSTDPVQA 420
QAATAAIESP RSSSLLSCPD SEPRQSVEAS GHHAHHQSDN SNERLSPKPG TGEPVLSLHY 480
STEGTTTSTI KLNFTDEWSS TASSSRGNGS HCKSEGQEEC LVPPSSVQPP EGDSETRAPE 540
ELSEKGTLPE NLTQNQIDTA QLDNFPAEPL DSNSGEKNNP SQDSPCGLPE EGTLSETDRE 600
TCEQASTESA TRHASTKPEL PSQTEAIEQA STESATRHTS ANPELPSQTE AIAPLAHEDP 660
SARDSALQDT DDSDDDPVLI PGARYRTGPG DRRSAVARIQ EFFRRRKERK EMEELDTLNI 720
RRPLVKMVYK GHRNSRTMIK EANFWGANFV MSGSDCGHIF IWDRHTAEHL MLLEADNHVV 780
NCLQPHPFDP ILASSGIDYD IKIWSPLEES RIFNRKLADE VITRNELMLE ETRNTITVPA 840
SFMLRMLASL NHIRADRLEG DRSEGSGQEN ENEDEE 876 
Gene Ontology
 GO:0080008; C:Cul4-RING ubiquitin ligase complex; ISS:UniProtKB.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IEA:Compara.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway. 
Interpro
 IPR000048; IQ_motif_EF-hand-BS.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00015; IQ
 SM00320; WD40 
PROSITE
 PS50096; IQ
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS