CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021216
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Zinc finger protein 541 
Protein Synonyms/Alias
  
Gene Name
 ZNF541 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
286VSSIVHQKTPSPGPAubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Component of some chromatin remodeling multiprotein complex that plays a role during spermatogenesis (By similarity). 
Sequence Annotation
 DOMAIN 1072 1164 ELM2.
 DOMAIN 1179 1230 SANT.
 ZN_FING 140 162 C2H2-type 1.
 ZN_FING 168 190 C2H2-type 2.
 ZN_FING 196 220 C2H2-type 3.
 ZN_FING 838 860 C2H2-type 4.
 ZN_FING 1308 1330 C2H2-type 5.  
Keyword
 Alternative splicing; Complete proteome; Developmental protein; Differentiation; Metal-binding; Nucleus; Polymorphism; Reference proteome; Repeat; Repressor; Spermatogenesis; Transcription; Transcription regulation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1365 AA 
Protein Sequence
MDQYSLGDEG ALPSEMHLPS FSESQGLNCS DTLNRDLGPN TRGFLYAGLS GLDPDPSLPT 60
PDMSSEVLED NLDTLSLYSG KDSDSVKLLE EYADSESQAS LQDLGLGVLK AKEADEGGRA 120
TSGSARKGKR QHSSPQNPLL DCSLCGKVFS SASSLSKHYL THSQERKHVC KICSKAFKRQ 180
DHLTGHMLTH QKTKPFVCIE QGCSKSYCDY RSLRRHYEVH HGLCILKEAP PEEEACGDSP 240
HAHESAGQPP PSSLRSLVPP EARSPGSLLP HRDLLRRIVS SIVHQKTPSP GPAPAGASDS 300
EGRNTACPCP ASSGSSSCTP AGPHAAPAAL DTELPEEPCL PQKEPATDVF TAPNSRAAEN 360
GAPDPPEPEP DTALLQARST AECWPEGGSV PACLPLFRGQ TVPASSQPSS HSFQWLRNLP 420
GCPKSKGNNV FVVHKPSAVP SREGSESGPG PSSGSPSEES PPGPGGGLED ALPFPAALLR 480
VPAEAPSDPR SASGEDDPCA PKKVKVDCDS FLCQNPGEPG LQEAQKAGGL PADASPLFRQ 540
LFLKSQEPLV SHEQMQVFQM ITKSQRIFSH AQVAAVSSQL PAPEGKPAAL RPLQGPWPQQ 600
PPPLAPAVDS LHAGPGNPEA EGSPARRRKT TPGVPREASP GSTRRDAKGG LKVAAVPTPL 660
AAPSLDPSRN PDISSLAKQL RSSKGTLDLE DIFPSTGQRQ TQLGGEEPPG ASLPGKQAPA 720
ENGAASRITK GEKGPACSRG GGYRLLGNPR APRFSGFRKE KAKMDMCCAA SPSQVAMASF 780
SSAGPPADPS KSKLTIFSRI QGGNIYRLPH PVKEENVAGR GNQQNGSPTD WTKPRSTFVC 840
KNCSQMFYTE KGLSSHMCFH SDQWPSPRGK QEPQVFGTEF CKPLRQVLRP EGDRHSPPGT 900
KKPLDPTAAA PLVVPQSIPV VPVTRHIGSM AMMEWCSRWL QATTCGSKLL QGQEKDGEER 960
DSKESSQQRK RKKRPPPSTA GEPGPAGCHQ SRLRSPMFLV DCLLKGLFQC SPYTPPPMLS 1020
PIREGSGVYF NTLCSTSTQA SPDQLISSML DQVDGSFGIC VVKDDTKISI EPHINIGSRF 1080
QAEIPELQER SLAGTDEHVA SLVWKPWGDM MISSETQDRV TELCNVACSS VMPGGGTNLE 1140
LALHCLHEAQ GNVQVALETL LLRGPHKPRT HLLADYRYTG SDVWTPIEKR LFKKAFYAHK 1200
KDFYLIHKMI QTKTVAQCVE YYYIWKKMIK FDCGRAPGLE KRVKREPEEV ERTEEKVPCS 1260
PRERPSHHPT PKLKTKSYRR ESILSSSPNA GSKRTPELLG SAESQGIFPC RECERVFDKI 1320
KSRNAHMKRH RLQDHVEPII RVKWPVKPFQ LKEEELGADI GPLQW 1365 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003682; F:chromatin binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
 GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR000949; ELM2_dom.
 IPR009057; Homeodomain-like.
 IPR001005; SANT/Myb.
 IPR017884; SANT_dom.
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like.
 IPR013087; Znf_C2H2/integrase_DNA-bd. 
Pfam
 PF01448; ELM2 
SMART
 SM00717; SANT
 SM00355; ZnF_C2H2 
PROSITE
 PS51156; ELM2
 PS51293; SANT
 PS00028; ZINC_FINGER_C2H2_1
 PS50157; ZINC_FINGER_C2H2_2 
PRINTS