CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016090
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 USP6 N-terminal-like protein 
Protein Synonyms/Alias
  
Gene Name
 Usp6nl 
Gene Synonyms/Alias
 Kiaa0019 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
244HHEKILNKFLSKLKQubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Acts as a GTPase-activating protein for RAB5A and RAB43. Involved in receptor trafficking. In complex with EPS8 inhibits internalization of EGFR. Involved in retrograde transport from the endocytic pathway to the Golgi apparatus. Involved in the transport of Shiga toxin from early and recycling endosomes to the trans-Golgi network. Required for structural integrity of the Golgi complex (By similarity). 
Sequence Annotation
 DOMAIN 100 292 Rab-GAP TBC.
 MOD_RES 389 389 Phosphoserine (By similarity).
 MOD_RES 394 394 Phosphoserine (By similarity).
 MOD_RES 544 544 Phosphoserine.
 MOD_RES 574 574 Phosphoserine (By similarity).
 MOD_RES 631 631 Phosphoserine (By similarity).
 MOD_RES 644 644 Phosphoserine (By similarity).
 MOD_RES 648 648 Phosphoserine (By similarity).
 MOD_RES 662 662 Phosphoserine.
 MOD_RES 669 669 Phosphoserine (By similarity).
 MOD_RES 704 704 Phosphoserine (By similarity).
 MOD_RES 717 717 Phosphotyrosine (By similarity).  
Keyword
 Alternative splicing; Complete proteome; Cytoplasmic vesicle; Golgi apparatus; GTPase activation; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 819 AA 
Protein Sequence
MNSDQDVALK LAQERAEIVA KYDRGREGAE IEPWEDADYL VYKVTDRFGF LHEEELPYHN 60
AAADRQKQLE IERTSKWLKM LKKWERYKNT EKFHRRIYKG IPLQLRGEVW ALLLEIPKMK 120
EETRDLYSKL KHRARGCSPD IRQIDLDVNR TFRDHIMFRD RYGVKQQSLF HVLAAYSIYN 180
TEVGYCQGMS QITALLLMYM NEEDAFWALV KLFSGPKHAM HGFFVQGFPK LLRFQEHHEK 240
ILNKFLSKLK QHLDSQEIYT SFYTMKWFFQ CFLDRTPFRL NLRIWDIYIF EGERVLTAMS 300
YTILKLHKKH LMKLSMEELV EFLQETLAKD FFFEDDFVIE QLQVSMAELK RAKLDLPEPG 360
KEDEYPKKPL GQLPPESACV NHLSNGQRSV GRPSPKTSSR REDGSPRKNH EHSPVHHSRN 420
GTPERAGQSR RKSVDEGSKN LKHEAESQRK PSPGMQDSSR HYNHAAANQN SNAISNVRKE 480
FMPKWRKPSD ASAIERTTKY AVEGKSHSAL PALPVAIPGS AETRLPNSRQ KMKALDGGEG 540
KRGSNASQYD NVPGGESEHG ASAEEGPERT HPHSPRKHPE PSPSPPKVPN KFTFKVQPPS 600
HVRYPPQLPE EDHRAAYPPS YSNPPVYHGN SPKHVPTAHS GFVSTQISPR PQINPSRRPY 660
GSSLSVDTSP EKAYSRPTPV VLPSSRIEVL PIDMGARGYG SSGSPKNGQF ILPPVDYLPE 720
NRKWSEVSYT YRPEMHGQSW TRDAHRSHLS NLPNYAAFQH IPFQAHGLPE VSVDSPVRYK 780
MSAAVEDASP PGYPYAGPSP SAHHYRNGEG LSVQESVLL 819 
Gene Ontology
 GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.
 GO:0031410; C:cytoplasmic vesicle; ISS:UniProtKB.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0005097; F:Rab GTPase activator activity; ISS:UniProtKB.
 GO:0007030; P:Golgi organization; ISS:UniProtKB.
 GO:0035526; P:retrograde transport, plasma membrane to Golgi; ISS:UniProtKB. 
Interpro
 IPR000195; Rab-GTPase-TBC_dom. 
Pfam
 PF00566; RabGAP-TBC 
SMART
 SM00164; TBC 
PROSITE
 PS50086; TBC_RABGAP 
PRINTS