CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-036039
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA-directed RNA polymerase II subunit RPB11-b2 
Protein Synonyms/Alias
  
Gene Name
 POLR2J3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
25ITINKDTKVPNACLFubiquitination[1]
36ACLFTINKEDHTLGNubiquitination[1, 2]
46HTLGNIIKSLECNGTubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 73 AA 
Protein Sequence
MNAPPAFESF LLFEGEKITI NKDTKVPNAC LFTINKEDHT LGNIIKSLEC NGTILLTATS 60
ASRVQVILLL QPS 73 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR009025; DNA-dir_RNA_pol_RBP11-like. 
Pfam
  
SMART
  
PROSITE
  
PRINTS