CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-033971
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Ligand-dependent nuclear receptor-interacting factor 1 
Protein Synonyms/Alias
  
Gene Name
 Lrif1 
Gene Synonyms/Alias
 4933421E11Rik 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
39TIGSDGKKLLQLLPIubiquitination[1]
307SSNNVATKVLNTFVGubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 601 AA 
Protein Sequence
MSNSLQSVIL KTAEEKSGSR CISGCMYQVV PTIGSDGKKL LQLLPISKSS GNLIPVVQSP 60
VMSHGLKANT EKPVQVTFQT QISSSSTSAS VQLPVFQPAN TTKCFFTGAI DTTGKDRVTS 120
VRTGNFTPPV SNIQNHGVKI HKLTRQTFTI PPSTQNDSSH FIFNTPSLLP NVNSSILPSG 180
NHLKIPAHAE VKSVLASSLP PLVQQKILGT ATTSTSGTVE ASQIPTVVYV HPVNSVKFVV 240
TKKTQTIYPK PVTFNTLQIP PNVATETQLK GGQHPQAAPV NSIFQEYLQP GIPCIIPVKS 300
SNNVATKVLN TFVGRKNLGD NTIDTPLLNT NSSGRTHSVS EPIKDNALIM FNGKVWLNEK 360
GTCGLPSKID QQNSVSSDIP LKDSSQLVSS SIVTEISREI LNSVLVKSKS FQLKTKSLSN 420
SQLASMANLR AEKNEKVERP SFSVTNPHTM NQSTHCLKQS KTVFINPVFP DGFRTGQNAP 480
RKGNLVQNIE KICSSVDAAT VTSQQCVFRD QESQTQYEMA SIVKKEIQEK GNNKKYSQGS 540
HTNIKASCLK NDAEFKKLFG LTKDLRVCLT RIPDHLSSGK SFNSFNSLMK SSSYKDANIV 600
V 601 
Gene Ontology
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR026191; LRIF1. 
Pfam
  
SMART
  
PROSITE
  
PRINTS