CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003126
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Fatty acid metabolism regulator protein 
Protein Synonyms/Alias
  
Gene Name
 fadR 
Gene Synonyms/Alias
 oleR; thdB; b1187; JW1176 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
195LALGFYHKLSALCSEacetylation[1]
228EIWHRMQKNLPGDLAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Multifunctional regulator of fatty acid metabolism. Represses transcription of at least eight genes required for fatty acid transport and beta-oxidation including fadA, fadB, fadD, fadL and fadE. Activates transcription of at least three genes required for unsaturated fatty acid biosynthesis: fabA, fabB and iclR, the gene encoding the transcriptional regulator of the aceBAK operon encoding the glyoxylate shunt enzymes. Binding of FadR is specifically inhibited by long chain fatty acyl-CoA compounds. 
Sequence Annotation
 DOMAIN 6 74 HTH gntR-type.
 DNA_BIND 34 53 H-T-H motif (By similarity).  
Keyword
 3D-structure; Activator; Complete proteome; Cytoplasm; Direct protein sequencing; DNA-binding; Fatty acid metabolism; Lipid metabolism; Reference proteome; Repressor; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 239 AA 
Protein Sequence
MVIKAQSPAG FAEEYIIESI WNNRFPPGTI LPAERELSEL IGVTRTTLRE VLQRLARDGW 60
LTIQHGKPTK VNNFWETSGL NILETLARLD HESVPQLIDN LLSVRTNIST IFIRTAFRQH 120
PDKAQEVLAT ANEVADHADA FAELDYNIFR GLAFASGNPI YGLILNGMKG LYTRIGRHYF 180
ANPEARSLAL GFYHKLSALC SEGAHDQVYE TVRRYGHESG EIWHRMQKNL PGDLAIQGR 239 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:HAMAP.
 GO:0000062; F:fatty-acyl-CoA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:EcoCyc.
 GO:0019395; P:fatty acid oxidation; EXP:EcoCyc.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:EcoCyc.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:EcoCyc.
 GO:0019217; P:regulation of fatty acid metabolic process; IEA:HAMAP.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR014178; FA-response_TF_FadR.
 IPR008920; FA-response_TF_FadR_C.
 IPR027376; FadR/GntR_C.
 IPR000524; Tscrpt_reg_HTH_GntR.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF07840; FadR_C
 PF00392; GntR 
SMART
 SM00345; HTH_GNTR 
PROSITE
 PS50949; HTH_GNTR 
PRINTS
 PR00035; HTHGNTR.