CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010852
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA polymerase alpha-binding protein 
Protein Synonyms/Alias
 Chromosome replication protein CHL15; Chromosome transmission fidelity protein 4; Protein POB1 
Gene Name
 CTF4 
Gene Synonyms/Alias
 CHL15; POB1; YPR135W; P9659.7 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
40NGLTKILKTNNPEEEubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Accessory factor for DNA replication. It plays a role in accurately duplicating the genome in vivo. 
Sequence Annotation
 REPEAT 10 49 WD 1.
 REPEAT 134 173 WD 2.
 REPEAT 227 266 WD 3.
 REPEAT 273 313 WD 4.
 REPEAT 699 739 WD 5.
 MOD_RES 377 377 Phosphoserine.
 MOD_RES 379 379 Phosphoserine.
 MOD_RES 398 398 Phosphoserine.
 MOD_RES 401 401 Phosphothreonine.
 MOD_RES 411 411 Phosphothreonine.
 MOD_RES 463 463 Phosphoserine.  
Keyword
 Complete proteome; Direct protein sequencing; DNA replication; Nucleus; Phosphoprotein; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 927 AA 
Protein Sequence
MVSVIDKLVF DFGGKTLVSL APDNNTLCVA NKNGLTKILK TNNPEEEPET LDSSKLVSSI 60
KCYSNSHFLM TTMQGDALRY NIDSSQEELL ARFALPLRDC CVIHSGKMAV FGGDDLELIL 120
LELDDETHKK HAIKIDEQVS QISYNSQMNI LAVSMINGKV QIFSLTSTIP NKVHELNDYI 180
VANSYDDTHR DKILSNMMDD IDKDNDNDLS ETADPDENNV ADPEFCAANR ICTRVAWHPK 240
GLHFALPCAD DTVKIFSIKG YSLQKTLSTN LSSTKAHFID LQFDPLRGTY IAAVDLNNKL 300
TVWNWETSEI HYTREFKRKI TNIAWKIQAD SKTLDLVLGT WSGSIAIVQN LAESVVSNIP 360
DQSVAESSTK HGLFVDSESD LENLEGNDDI NKSDKLFSDI TQEANAEDVF TQTHDGPSGL 420
SEKRKYNFED EEDFIDDDDG AGYISGKKPH NEHSYSRVHK THSFPISLAN TGKFRYMPFS 480
PAGTPFGFTD RRYLTMNEVG YVSTVKNSEQ YSITVSFFDV GRFREYHFED LFGYDLCFLN 540
EKGTLFGQSK TGQIQYRPHD SIHSNWTKII PLQAGERITS VAATPVRVIV GTSLGYFRSF 600
NQFGVPFAVE KTSPIVALTA QNYRVFSVHY SQFHGLSYSL SELGTSSKRY YKRECPLPMS 660
LPNINSDMKK DANLDYYNFN PMGIKSLFFS SYGDPCIFGS DNTLLLLSKW RSPEESKWLP 720
ILDSNMEIWK MSGGKETTDI HVWPLALAYD TLNCILVKGK HIWPEFPLPL PSEMEIRMPV 780
FVKSKLLEEN KAILNKKNEI GADTEAEEGE EDKEIQIPVS MAAEEEYLRS KVLSELLTDT 840
LENDGEMYGN ENEVLAALNG AYDKALLRLF ASACSDQNVE KALSLAHELK QDRALTAAVK 900
ISERAELPSL VKKINNIREA RYEQQLK 927 
Gene Ontology
 GO:0031298; C:replication fork protection complex; IDA:SGD.
 GO:0003682; F:chromatin binding; IDA:SGD.
 GO:0003677; F:DNA binding; ISS:SGD.
 GO:0006270; P:DNA replication initiation; IMP:SGD.
 GO:0000727; P:double-strand break repair via break-induced replication; IMP:SGD.
 GO:0007064; P:mitotic sister chromatid cohesion; IMP:SGD.
 GO:0001302; P:replicative cell aging; IMP:SGD. 
Interpro
 IPR022100; DUF3639.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF12341; DUF3639 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS