CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018268
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone deacetylase 7 
Protein Synonyms/Alias
 HD7; Histone deacetylase 7A; HD7a 
Gene Name
 HDAC7 
Gene Synonyms/Alias
 HDAC7A 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
659RLKLDNGKLAGLLAQubiquitination[1]
Reference
 [1] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789] 
Functional Description
 Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Involved in muscle maturation by repressing transcription of myocyte enhancer factors such as MEF2A, MEF2B and MEF2C. During muscle differentiation, it shuttles into the cytoplasm, allowing the expression of myocyte enhancer factors (By similarity). May be involved in Epstein-Barr virus (EBV) latency, possibly by repressing the viral BZLF1 gene. 
Sequence Annotation
 REGION 1 268 Transcription repression 1 (By
 REGION 1 98 Interaction with MEF2C (By similarity).
 REGION 49 149 Interaction with MEF2A (By similarity).
 REGION 218 546 Transcription repression 2 (By
 REGION 518 865 Histone deacetylase.
 REGION 877 952 Interaction with SIN3A (By similarity).
 MOTIF 918 952 Nuclear export signal (By similarity).
 ACT_SITE 670 670 By similarity.
 METAL 533 533 Zinc.
 METAL 535 535 Zinc.
 METAL 541 541 Zinc.
 METAL 618 618 Zinc.
 MOD_RES 109 109 Phosphoserine.
 MOD_RES 155 155 Phosphoserine; by MARK2, MARK3 and
 MOD_RES 181 181 Phosphoserine; by PKD/PRKD2.
 MOD_RES 283 283 Phosphoserine.
 MOD_RES 286 286 Phosphothreonine.
 MOD_RES 358 358 Phosphoserine; by PKD/PRKD1 (By
 MOD_RES 486 486 Phosphoserine.  
Keyword
 3D-structure; Alternative splicing; Chromatin regulator; Complete proteome; Cytoplasm; Hydrolase; Metal-binding; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Repressor; Transcription; Transcription regulation; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 952 AA 
Protein Sequence
MSDLRKRELG ALFTSRGTGG VEWDGTQVSP GAHYCSPTGA GCPRPCADTP GPQPQPMDLR 60
VGQRPPVEPP PEPTLLALQR PQRLHHHLFL AGLQQQRSVE PMRLSMDTPM PELQVGPQEQ 120
ELRQLLHKDK SKRSAVASSV VKQKLAEVIL KKQQAALERT VHPNSPGIPY RTLEPLETEG 180
ATRSMLSSFL PPVPSLPSDP PEHFPLRKTV SEPNLKLRYK PKKSLERRKN PLLRKESAPP 240
SLRRRPAETL GDSSPSSSST PASGCSSPND SEHGPNPILG SEALLGQRLR LQETSVAPFA 300
LPTVSLLPAI TLGLPAPARA DSDRRTHPTL GPRGPILGSP HTPLFLPHGL EPEAGGTLPS 360
RLQPILLLDP SGSHAPLLTV PGLGPLPFHF AQSLMTTERL SGSGLHWPLS RTRSEPLPPS 420
ATAPPPPGPM QPRLEQLKTH VQVIKRSAKP SEKPRLRQIP SAEDLETDGG GPGQVVDDGL 480
EHRELGHGQP EARGPAPLQQ HPQVLLWEQQ RLAGRLPRGS TGDTVLLPLA QGGHRPLSRA 540
QSSPAAPASL SAPEPASQAR VLSSSETPAR TLPFTTGLIY DSVMLKHQCS CGDNSRHPEH 600
AGRIQSIWSR LQERGLRSQC ECLRGRKASL EELQSVHSER HVLLYGTNPL SRLKLDNGKL 660
AGLLAQRMFV MLPCGGVGVD TDTIWNELHS SNAARWAAGS VTDLAFKVAS RELKNGFAVV 720
RPPGHHADHS TAMGFCFFNS VAIACRQLQQ QSKASKILIV DWDVHHGNGT QQTFYQDPSV 780
LYISLHRHDD GNFFPGSGAV DEVGAGSGEG FNVNVAWAGG LDPPMGDPEY LAAFRIVVMP 840
IAREFSPDLV LVSAGFDAAE GHPAPLGGYH VSAKCFGYMT QQLMNLAGGA VVLALEGGHD 900
LTAICDASEA CVAALLGNRV DPLSEEGWKQ KPNLNAIRSL EAVIRVHMGA LTLSQIPGHG 960
SSQQQAGGAF SRPGHPCRAA VVMVNTGAAC SAWPPVQTPG CLECQGLTKK KWRQ 1014 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0000118; C:histone deacetylase complex; IEA:InterPro.
 GO:0005654; C:nucleoplasm; TAS:Reactome.
 GO:0071889; F:14-3-3 protein binding; IDA:UniProtKB.
 GO:0003682; F:chromatin binding; IEA:Compara.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0032041; F:NAD-dependent histone deacetylase activity (H3-K14 specific); IEA:EC.
 GO:0097372; F:NAD-dependent histone deacetylase activity (H3-K18 specific); IEA:EC.
 GO:0046969; F:NAD-dependent histone deacetylase activity (H3-K9 specific); IEA:EC.
 GO:0046970; F:NAD-dependent histone deacetylase activity (H4-K16 specific); IEA:EC.
 GO:0003714; F:transcription corepressor activity; IEA:Compara.
 GO:0007043; P:cell-cell junction assembly; IEA:Compara.
 GO:0070932; P:histone H3 deacetylation; IEA:GOC.
 GO:0070933; P:histone H4 deacetylation; IEA:GOC.
 GO:0032703; P:negative regulation of interleukin-2 production; IDA:BHF-UCL.
 GO:0045668; P:negative regulation of osteoblast differentiation; IMP:UniProtKB.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0007219; P:Notch signaling pathway; TAS:Reactome.
 GO:0090050; P:positive regulation of cell migration involved in sprouting angiogenesis; IMP:BHF-UCL.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0001570; P:vasculogenesis; IEA:Compara. 
Interpro
 IPR000286; His_deacetylse.
 IPR023801; His_deacetylse_dom.
 IPR017320; Histone_deAcase_II_euk. 
Pfam
 PF00850; Hist_deacetyl 
SMART
  
PROSITE
  
PRINTS
 PR01270; HDASUPER.