CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-034860
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Rsf1 
Protein Synonyms/Alias
  
Gene Name
 Rsf1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
324DSFKENVKPIKVEAKacetylation[1]
341RVDPKDLKGSLERLGacetylation[1]
515EKEVSLGKAVDGSASacetylation[1]
1054GGGVGRGKDISTITGacetylation[1]
1065TITGHRGKDISTILDacetylation[1]
1239QKSLRRGKEIRRVHKacetylation[1]
1341PSEQESSKKPYRIESacetylation[1]
1342SEQESSKKPYRIESDacetylation[1]
1381TNGQSPGKAIENLMGacetylation[1]
1389AIENLMGKATEKSQTacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1444 AA 
Protein Sequence
MATVAAAAAA AVAAMAPPGC PGSCPNFAVV CSFLERYGPL LDLPELPFPE LERVLQAPPP 60
DIGHGEVPKE LVELHLKLMR KIGKSVTADR WEKYLIKICQ EFNSTWAWEM EKKGYLEMSV 120
ECKLALLKYL CECQFDDNLK FKNIINEEDA DTMRLQPIGR DKDGLMYWYQ LDQDHNVRMY 180
IEEQDDQDGS SWKCIVRNRN ELAETLALLR AQIDPVLLKN SSQQEDPSRE SPTLEDEETK 240
KDEETPKQEA SRGNEKTEAD ERSMDSRKRS AANALEGPAV KIEKADEKEL VKLPVIVKLE 300
KPVPETEDKK IIREESDSFK ENVKPIKVEA KECRVDPKDL KGSLERLGSQ EPERADFGSN 360
IKSSQDITEK STEETEKLKN DQQAKIPLKK REIKLSDDFD SPVKGHLCKS ATPTKECLKD 420
DVKQEEETCK RVSTISALSH EGKQLMNGEM NDDKVTASLK TEQLETQLCH TKEDSSSIPA 480
KDGSAGLEGS GVECLNSVLT STKTSELEKE VSLGKAVDGS ASDVESHSQK GRGEEPGPPN 540
MDMPLEPSEK TTDLSLKSTL SATESCPTKI EEKAPKSKGE NHTAGIECLE KVEKAKKTSV 600
DKDIQRLSPI PEEVVRGPLE SEESGLCEVA ETPLPLEMTG AKEKQTSEKK GVDCLSRGSS 660
EGQSLENASP DILRENSESS RVEMAKLDNA QTSGVEDTSQ TKGSVQKNKC KYKLVSEGNS 720
TASENTEITS ERKKEGIKLT IRISSRKKKP DCPPQIVDSE SKEEKAGKEE EKTSVGRTLR 780
RSPRISRPTA KVAEIRDQKA DKKRAEGEEG VEGETTSLQT ADKKEHLKKA EKDTNSKASK 840
VKPKGKVRWT GSRTRGRWKY SSNDESEGSE SDKSSAASEE EEGKESEEAV LPDDDEPCKK 900
CGLPNHPELI LLCDSCDSGY HTACLRPPLM IIPDGEWFCP PCQHKLLCEK LEEQLQDLDV 960
ALKKKERAER RKERLVYVGI SIENIIPPQE PEFSEDQEEK KKDAKKSKAN VLERRSTRTR 1020
KCISYRFDEF DEAIDEAIED DIKEADGGGV GRGKDISTIT GHRGKDISTI LDEERKENKR 1080
PQRAAAARRK KRRRLNDLDS DSNLDEEESE DEFKISDGSQ DEFVVSDENP DESEEEPPSN 1140
EDSDTDFCSR RLRRHPSRPM RQSRRLRRKT QKKKYSDDDE EEEESEENSR DSESDFSDDF 1200
SDEFVETRRR RSRRNQKRQI NYKEDSESDG SQKSLRRGKE IRRVHKRRLS SSESEESYMS 1260
KNSEDDELTK ESKRSIRKRG RSTGEYSEAD EEEEEEGKPS RKRLHRIETD EESCDSAHGD 1320
ADQPARESQA SVLPSEQESS KKPYRIESDE EEDFENVGKV GSPLDYSLVD LPSTNGQSPG 1380
KAIENLMGKA TEKSQTPKDN GTASANLAPN GTSGGQEVGA PEEDEDELLR VTDLVDYVCN 1440
SEQL 1444 
Gene Ontology
 GO:0031213; C:RSF complex; IEA:Compara.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006338; P:chromatin remodeling; IEA:Compara.
 GO:0006352; P:DNA-dependent transcription, initiation; IEA:Compara.
 GO:0043392; P:negative regulation of DNA binding; IEA:Compara.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IEA:Compara.
 GO:0006334; P:nucleosome assembly; IEA:Compara.
 GO:0016584; P:nucleosome positioning; IEA:Compara.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:Compara.
 GO:0050434; P:positive regulation of viral transcription; IEA:Compara. 
Interpro
 IPR019786; Zinc_finger_PHD-type_CS.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF00628; PHD 
SMART
 SM00249; PHD 
PROSITE
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2 
PRINTS