CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-000087
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 High mobility group nucleosome-binding domain-containing protein 4 
Protein Synonyms/Alias
 Non-histone chromosomal protein HMG-17-like 3; Non-histone chromosomal protein 
Gene Name
 HMGN4 
Gene Synonyms/Alias
 HMG17L3; NHC 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
31RSARLSAKPAPPKPEubiquitination[1]
82ASTLQSQKAEGTGDAacetylation[2, 3]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [2] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [3] Proteomic investigations reveal a role for RNA processing factor THRAP3 in the DNA damage response.
 Beli P, Lukashchuk N, Wagner SA, Weinert BT, Olsen JV, Baskcomb L, Mann M, Jackson SP, Choudhary C.
 Mol Cell. 2012 Apr 27;46(2):212-25. [PMID: 22424773
Functional Description
  
Sequence Annotation
 MOD_RES 80 80 Phosphoserine.
 MOD_RES 82 82 N6-acetyllysine.  
Keyword
 Acetylation; Complete proteome; DNA-binding; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 90 AA 
Protein Sequence
MPKRKAKGDA KGDKAKVKDE PQRRSARLSA KPAPPKPEPR PKKASAKKGE KLPKGRKGKA 60
DAGKDGNNPA KNRDASTLQS QKAEGTGDAK 90 
Gene Ontology
 GO:0000785; C:chromatin; IEA:InterPro.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0031492; F:nucleosomal DNA binding; IEA:InterPro. 
Interpro
 IPR000079; HMGN_fam. 
Pfam
 PF01101; HMG14_17 
SMART
 SM00527; HMG17 
PROSITE
 PS00355; HMG14_17 
PRINTS
 PR00925; NONHISHMG17.