CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012197
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Runt-related transcription factor 3 
Protein Synonyms/Alias
 Acute myeloid leukemia 2 protein; Core-binding factor subunit alpha-3; CBF-alpha-3; Oncogene AML-2; Polyomavirus enhancer-binding protein 2 alpha C subunit; PEA2-alpha C; PEBP2-alpha C; SL3-3 enhancer factor 1 alpha C subunit; SL3/AKV core-binding factor alpha C subunit 
Gene Name
 RUNX3 
Gene Synonyms/Alias
 AML2; CBFA3; PEBP2A3 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
129RNASAVMKNQVARFNubiquitination[1]
148VGRSGRGKSFTLTITacetylation[2]
186EPRRHRQKLEDQTKPacetylation[2]
192QKLEDQTKPFPDRFGacetylation[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Transforming growth factor-beta stimulates p300-dependent RUNX3 acetylation, which inhibits ubiquitination-mediated degradation.
 Jin YH, Jeon EJ, Li QL, Lee YH, Choi JK, Kim WJ, Lee KY, Bae SC.
 J Biol Chem. 2004 Jul 9;279(28):29409-17. [PMID: 15138260
Functional Description
 CBF binds to the core site, 5'-PYGPYGGT-3', of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, lck, IL-3 and GM-CSF promoters. 
Sequence Annotation
 DOMAIN 54 182 Runt.
 MOD_RES 243 243 Phosphoserine.  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 415 AA 
Protein Sequence
MRIPVDPSTS RRFTPPSPAF PCGGGGGKMG ENSGALSAQA AVGPGGRARP EVRSMVDVLA 60
DHAGELVRTD SPNFLCSVLP SHWRCNKTLP VAFKVVALGD VPDGTVVTVM AGNDENYSAE 120
LRNASAVMKN QVARFNDLRF VGRSGRGKSF TLTITVFTNP TQVATYHRAI KVTVDGPREP 180
RRHRQKLEDQ TKPFPDRFGD LERLRMRVTP STPSPRGSLS TTSHFSSQPQ TPIQGTSELN 240
PFSDPRQFDR SFPTLPTLTE SRFPDPRMHY PGAMSAAFPY SATPSGTSIS SLSVAGMPAT 300
SRFHHTYLPP PYPGAPQNQS GPFQANPSPY HLYYGTSSGS YQFSMVAGSS SGGDRSPTRM 360
LASCTSSAAS VAAGNLMNPS LGGQSDGVEA DGSHSNSPTA LSTPGRMDEA VWRPY 415 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0000790; C:nuclear chromatin; ISS:BHF-UCL.
 GO:0005524; F:ATP binding; NAS:UniProtKB.
 GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; ISS:BHF-UCL.
 GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; ISS:BHF-UCL.
 GO:0007411; P:axon guidance; IEA:Compara.
 GO:0048469; P:cell maturation; IEA:Compara.
 GO:0031069; P:hair follicle morphogenesis; IEA:Compara.
 GO:0006917; P:induction of apoptosis; ISS:UniProtKB.
 GO:0032609; P:interferon-gamma production; IEA:Compara.
 GO:0045786; P:negative regulation of cell cycle; ISS:UniProtKB.
 GO:0050680; P:negative regulation of epithelial cell proliferation; ISS:UniProtKB.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:BHF-UCL.
 GO:0048935; P:peripheral nervous system neuron development; TAS:BHF-UCL.
 GO:0006468; P:protein phosphorylation; IDA:UniProtKB. 
Interpro
 IPR000040; AML1_Runt.
 IPR008967; p53-like_TF_DNA-bd.
 IPR012346; p53/RUNT-type_TF_DNA-bd.
 IPR013524; Runt_dom.
 IPR027384; Runx_central_dom.
 IPR013711; RunxI_C_dom.
 IPR016554; TF_Runt-rel_RUNX. 
Pfam
 PF00853; Runt
 PF08504; RunxI 
SMART
  
PROSITE
 PS51062; RUNT 
PRINTS
 PR00967; ONCOGENEAML1.