CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016244
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Zinc finger protein 410 
Protein Synonyms/Alias
 Another partner for ARF 1; Zinc finger protein APA-1 
Gene Name
 ZNF410 
Gene Synonyms/Alias
 APA1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
254FVWPAHFKYHLKTHRubiquitination[1]
275CPAEGCGKSFYVLQRubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Transcription factor that activates transcription of matrix-remodeling genes such as MMP1 during fibroblast senescence. 
Sequence Annotation
 ZN_FING 219 243 C2H2-type 1.
 ZN_FING 249 273 C2H2-type 2.
 ZN_FING 279 303 C2H2-type 3.
 ZN_FING 309 333 C2H2-type 4.
 ZN_FING 339 362 C2H2-type 5.  
Keyword
 Activator; Alternative splicing; Complete proteome; DNA-binding; Metal-binding; Nucleus; Reference proteome; Repeat; Transcription; Transcription regulation; Ubl conjugation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 478 AA 
Protein Sequence
MLSDELESKP ELLVQFVQNT SIPLGQGLVE SEAKDITCLS LLPVTEASEC SRLMLPEPVP 60
WREEDGKSGC SDLNDTTNHS NSSKEVPSSA VLRSLRVNVG PDGEETRAQT VQKSPEFLST 120
SESSSLLQDL QPSDSTSFIL LNLTRAGLGS SAEHLVFVQD EAEDSGNDFL SSESTDSSIP 180
WFLRVQELAH DSLIAATRAQ LAKNAKTSSN GENVHLGSGD GQSKDSGPLP QVEKKLKCTV 240
EGCDRTFVWP AHFKYHLKTH RNDRSFICPA EGCGKSFYVL QRLKVHMRTH NGEKPFMCHE 300
SGCGKQFTTA GNLKNHRRIH TGEKPFLCEA QGCGRSFAEY SSLRKHLVVH SGEKPHQCQV 360
CGKTFSQSGS RNVHMRKHHL QLGAAGSQEQ EQTAEPLMGS SLLEEASVPS KNLVSMNSQP 420
SLGGESLNLP NTNSILGVDD EVLAEGSPRS LSSVPDVTHH LVTMQSGRQS YEVSVLTAVN 480
PQESLAPLPR LECSGAFSAH CNLCLPGSSD SPASAS 516 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like.
 IPR013087; Znf_C2H2/integrase_DNA-bd. 
Pfam
  
SMART
 SM00355; ZnF_C2H2 
PROSITE
 PS00028; ZINC_FINGER_C2H2_1
 PS50157; ZINC_FINGER_C2H2_2 
PRINTS