CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035076
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein LOC685179 
Protein Synonyms/Alias
  
Gene Name
 Smarcc2 
Gene Synonyms/Alias
 LOC685179 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
155IEPKLLGKLKDIVKRacetylation[1]
359VEEVTLPKTVNTKKDacetylation[1]
568FPDKGKEKPADMQNFacetylation[1]
769ESQAADEKKEPKEPRacetylation[1]
795EEISEAPKKDEEKGKacetylation[1]
796EISEAPKKDEEKGKEacetylation[1]
800APKKDEEKGKEADSEacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1211 AA 
Protein Sequence
MAVRKKDGGP NVKYYEAADT VTQFDNVRLW LGKNYKKYIQ AEPPTNKSLS SLVVQLLQFQ 60
EEVFGKHVSN APLTKLPIKC FLDFKAGGSL CHILAAAYKF KSDQGWRRYD FQNPSRMDRN 120
VEMFMTIEKS LVQNNCLSRP NIFLCPEIEP KLLGKLKDIV KRHQGTISED KSNASHVVYP 180
APGNLEEEEW VRPVMKRDKQ VLLHWGYYPD SYDTWIPASE IEASVEDAPT PEKPRKVHAK 240
WILDTDTFNE WMNEEDYEVS DDKSPVSRRK KISAKTLTDE VNSPDADRRD KKGGNYKKRK 300
RSPSPSPTPE AKKKNAKKGP STPYTKSKRG HREEEQEDLT KDMDEPSPVP NVEEVTLPKT 360
VNTKKDSESA PVKGGTMTDL DEQDDESMET TGKDEDENST GNKGEQTKSA DLHEDNVTEQ 420
THHIIVPSYA AWFDYNSVHA IERRALPEFF NGKNKSKTPE IYLAYRNFMI DTYRLNPQEY 480
LTSTACRRNL AGDVCAIMRV HAFLEQWGLI NYQVDAESRP TPMGPPPTSH FHVLADTPSG 540
LVPLQPKPPQ QGSASQQMLN FPDKGKEKPA DMQNFGLRTD MYTKKNIPSK SKAAASATRE 600
WTEQETLLLL EALEMYKDDW NKVSEHVGSR TQDECILHFL RLPIEDPYLE DSEASLGPLA 660
YQPIPFSQSG NPVMSTVAFL ASVVDPRVAS AAAKSALEEF SKMKEEVPTA LVEAHVRKVE 720
EAAKVTGKAD PAFGLESSGI AGTASDEPER IEESGTEEAR AESQAADEKK EPKEPREGGG 780
AVEEEAKEEI SEAPKKDEEK GKEADSEKES EKSDGDPIVD PEKDKEPTEG QEEGLKEVAE 840
PEGERKAKVE RDIGEGNLST AAAAALAAAA VKAKHLAAVE ERKIKSLVAL LVETQMKKLE 900
IKLRHFEELE TIMDREREAL EYQRQQLLAD RQAFHMEQLK YAEMRARQQH FQQMQQQPPP 960
PPPPLPPGSQ PIPPTGAAAP ATVHGLAVAP ASVASAPPGG GAPPGTLGPS EQIGQAGTTA 1020
GPQQPQQAGA PQPGAVPPGV PPPGPHGPSP FPNQQTPPSM MPGAVPGSGH PGVAGNAPLG 1080
LPFGLPLPPP AAPSIIPFGS LADSISINLP PPNLHGHHHL PFAPGTIPPP NLPVSMANPL 1140
HPNLPATTTM PSSLPLGPGL GSAAAQSPAI VAAVQGSLLP SASPLPDPGT PLPPDPTAPS 1200
PGTVTPVPPP Q 1211 
Gene Ontology
 GO:0071565; C:nBAF complex; IEA:Compara.
 GO:0071564; C:npBAF complex; IEA:Compara.
 GO:0016514; C:SWI/SNF complex; IEA:Compara.
 GO:0017053; C:transcriptional repressor complex; IEA:Compara.
 GO:0003682; F:chromatin binding; IEA:InterPro.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0006338; P:chromatin remodeling; IEA:Compara.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IEA:Compara.
 GO:0006337; P:nucleosome disassembly; IEA:Compara.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IEA:Compara. 
Interpro
 IPR001357; BRCT_dom.
 IPR000953; Chromo_domain/shadow.
 IPR009057; Homeodomain-like.
 IPR001005; SANT/Myb.
 IPR017884; SANT_dom.
 IPR007526; SWIRM.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00249; Myb_DNA-binding
 PF04433; SWIRM 
SMART
 SM00298; CHROMO
 SM00717; SANT 
PROSITE
 PS51293; SANT
 PS50934; SWIRM 
PRINTS