CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-039415
UniProt Accession
F1M9W9_RAT
;
F1M9W9
Genbank Protein ID
AABR06094204
;
CH473974
Genbank Nucleotide ID
EDL76098.1
Protein Name
Protein Trappc8
Protein Synonyms/Alias
Similar to TRS85 homolog (Predicted)
Gene Name
Trappc8
Gene Synonyms/Alias
RGD1309102_predicted; rCG_49308
Created Date
July 27, 2013
Organism
Rattus norvegicus (Rat)
NCBI Taxa ID
10116
Lysine Modification
Position
Peptide
Type
References
1218
QLPAYPE
K
NASEGAV
ubiquitination
[1]
Reference
[1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
J Proteome Res. 2012 Sep 7;11(9):4722-32. [
PMID: 22871113
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
1433 AA
Protein Sequence
MAQCVQSVQE LIPDSFVPCV AALCSDEAER LTRLNHLSFA ELLKPFSRLT SEVHMRDPNN 60
QLHIIKNLKI AVSNIVTQPP QPGAIGKLLN DVVSGSQPAE GLVANVITAG DYDLNISATT 120
PWFESYRETF LQSMPASDHE FLNHYLACML VASSAEAEPM EQFSKLSQEQ HRIQHNSDYS 180
YPKWFIPNTL KYYVLLHDVT SGDEQRAESI YEEMKQKYGT QGCYLLKINS RAPNRASDEQ 240
IPDPWSQYLQ KNSIQNQESY EDGPCTMTSS KNSDSNLLSL DGLDNEVKDG LPDNCRVHPL 300
QIDQCGDTPH NTDGSDHAKS ASSVHETKKA STGLIRGACL TLTDHDRIRQ FIQEFTFRGL 360
LPHVEKTIRQ LNDQLISRKG LSRSLFSATK KWFSGSKVPE KSISELKSTS GLLYPPEAPE 420
LQIRKMADLC FLVQHYDLAY SCYHTAKKDF LNDQAMLYAA GALEMAAVSA FLQPGAPRPY 480
PAHYMDTAIQ TYRDICKNMV LAERCVLLSA EILKSQSKYA EAAALLIRLT SEDSDLRSAL 540
LLEQAAHCFI NMKNPMVRKY AFHMILAGHR FSKAGQKKHA LRCYCQAMQV YKGKGWSLAE 600
DHINFTIGRQ SYTLRQLDNA VSAFRHILIN ESKQSAAQQG AFLREYLYVY KNVNQLSPDG 660
PLPQLPLPYI NSSATRVFFG HDRRPADGEK QAATHVSLDQ EYDAESSQQW RELEEHVVAV 720
ANKGVIPSSF YPTQYCLNSY SDNSRFPLAV VEEPITVEVA FRNPLKVPLL LSDLSLLWKF 780
QPKDTSGKDT EKERVTGEPE MIGTEVISEF LINSEESKVA RLKLFPHHIG ELHILGVVYN 840
LGTIQGSVTV DGIGALPGCH TGKHSLGMSV RGRQDLEIQG PRLNNTKEEK TSVKYGPDRR 900
LDPIVTEEMP LLEVFFIHFP TGLLCGEIRK AYVEFVNVSQ CPLTALKVVS KRPEFFTFGG 960
NTAALTPLSP STSENCSAYK TVVTASPSLG TAFVSTASSV DFGTGTGQQL EAIPVPLPDS 1020
VLLPGASVQL PMWLRGPDEE GVHEINFLFY YESVKKQPKK RHRILRHTAV ICTSRSLNVR 1080
ATVCRSNSLE DEEGRGGNML VFVDVENTNT SEAGVKEFHM VQVSSSSKHW QLHRSVNISE 1140
NRDAKLASRE KGKFCFKAVR CKQKEGDKQS SEKYTFADII FGNEQIISSA SPCADFFYRS 1200
LSSELRRTQD QLPAYPEKNA SEGAVRLIEK CSEVDLSIVV LWKAYVVEDN KQLILEGQHH 1260
VVVRTVGKEA CSHSQKQEPP EMELLKFFRP ENTTVSARPS VEQLSNLIKT SLHYPESFHH 1320
PFHQKSLCLV PVTLLLSNCS KAEVDVIVDL RHKTTSPEAL ETHGSFTWLG QTQYKLQLKS 1380
QETHSLQLKA CFVHTGVYNL GTPRVFAKLS DQVTVFETSQ QNSMPALIII NNA 1433
Gene Ontology
Interpro
IPR011990
; TPR-like_helical.
IPR024420
; TRAPP_III_complex_Trs85.
Pfam
PF12739
; TRAPPC-Trs85
SMART
PROSITE
PRINTS