CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037389
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 HMG domain-containing protein 3 
Protein Synonyms/Alias
  
Gene Name
 HMGXB3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
99LEKAKLEKEGLDPNSubiquitination[1]
107EGLDPNSKLSALTAVubiquitination[1, 2]
383TTEQNSSKENASKLTubiquitination[1]
627DRTEKTTKAIEVSSPubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1260 AA 
Protein Sequence
MDASYDGTEV TVVMEEIEEA YCYTSPGPPK KKKKYKIHGE KTKKPRSAYL LYYYDIYLKV 60
QQELPHLPQS EINKKISESW RLLSVAERSY YLEKAKLEKE GLDPNSKLSA LTAVVPDIPG 120
FRKILPRSDY IIIPKSSLQE DRSCPQLELC VAQNQMSPKG PPLVSNTAPE TVPSHAGMAE 180
QCLAVEALAE EVGALTQSGA VQEIATSEIL SQDVLLEDAS LEVGESHQPY QTSLVIEETL 240
VNGSPDLPTG SLAVPHPQVG ESVSVVTVMR DSSESSSSAP ATQFIMLPLP AYSVVENPTS 300
IKLTTTYTRR GHGTCTSPGC SFTYVTRHKP PKCPTCGNFL GGKWIPKEKP AKVKVELASG 360
VSSKGSVVKR NQQPVTTEQN SSKENASKLT LENSEAEAPG NCGTAVTKTP VVKSGVQPEV 420
TLGTTDNDSP GADVPTPSEG TSTSSPLPAP KKPTGADLLT PGSRAPELKG RARGKPSLLA 480
AARPMRAILP APVNVGRGSS MGLPRARQAF SLSDKTPSVR TCGLKPSTLK QLGQPIQQPS 540
GPGEVKLPSG PSNRTSQVKV VEVKPDMFPP YKYSCTVTLD LGLATSRGRG KCKNPSCSYV 600
YTNRHKPRIC PSCGVNLAKD RTEKTTKAIE VSSPLPDVLN ATEPLSTAQR EIQRQSTLQL 660
LRKVLQIPEN ESELAEVFAL IHELNSSRLI LSNVSEETVT IEQTSWSNYY ESPSTQCLLC 720
SSPLFKGGQN SLAGPQECWL LTASRLQTVT AQVKMCLNPH CLALHSFIDI YTGLFNVGNK 780
LLVSLDLLFA IRNQIKLGED PRVSINVVLK SVQEQTEKTL TSEELSQLQE LLCNGYWAFE 840
CLTVRDYNDM ICGICGVAPK VEMAQRSEEN VLALKSVEFT WPEFLGSNEV NVEDFWATME 900
TEVIEQVAFP ASIPITKFDA SVIAPFFPPL MRGAVVVNTE KDKNLDVQPV PGSGSALVRL 960
LQEGTCKLDE IGSYSEEKLQ HLLRQCGIPF GAEDSKDQLC FSLLALYESV QNGARAIRPP 1020
RHFTGGKIYK VCPHQVVCGS KYLVRGESAR DHVDLLASSR HWPPVYVVDM ATSVALCADL 1080
CYPELTNQMW GRNQGCFSSP TEPPVSVSCP ELLDQHYTVD MTETEHSIQH PVTKTATRRI 1140
VHAGLQPNPG DPSAGHHSLA LCPELAPYAT ILASIVDSKP NGVRQRPIAF DNATHYYLYN 1200
RLMDFLTSRE IVNRQIHDIV QSCQPGEVVI RDTLYRLGVA QIKTETEEEG EEEEVAAVAE 1260 
Gene Ontology
  
Interpro
 IPR009071; HMG_box_dom. 
Pfam
 PF00505; HMG_box 
SMART
 SM00398; HMG 
PROSITE
 PS50118; HMG_BOX_2 
PRINTS