CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002156
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein disulfide-isomerase 
Protein Synonyms/Alias
 PDI; Cellular thyroid hormone-binding protein; Prolyl 4-hydroxylase subunit beta 
Gene Name
 P4hb 
Gene Synonyms/Alias
 Pdia1 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
67ALAPEYAKAAAKLKAacetylation[1]
73AKAAAKLKAEGSEIRacetylation[1]
83GSEIRLAKVDATEESacetylation[1]
105VRGYPTIKFFKNGDTacetylation[1]
108YPTIKFFKNGDTASPacetylation[1]
132DDIVNWLKKRTGPAAacetylation[1]
202FSKYQLDKDGVVLFKacetylation[1]
210DGVVLFKKFDEGRNNacetylation[1]
224NFEGEITKEKLLDFIacetylation[1]
226EGEITKEKLLDFIKHacetylation[1]
273SVSDYDGKLSNFKKAacetylation[1]
278DGKLSNFKKAAEGFKacetylation[1]
310ILEFFGLKKEECPAVacetylation[1]
328TLEEEMTKYKPESDEacetylation[1]
330EEEMTKYKPESDELTacetylation[1]
354HFLEGKIKPHLMSQEacetylation[1]
368ELPEDWDKQPVKVLVacetylation[1]
377PVKVLVGKNFEEVAFacetylation[1]
387EEVAFDEKKNVFVEFacetylation[1]
411QLAPIWDKLGETYKDacetylation[1]
438ANEVEAVKVHSFPTLacetylation[1]
469ERTLDGFKKFLESGGacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 This multifunctional protein catalyzes the formation, breakage and rearrangement of disulfide bonds. At the cell surface, seems to act as a reductase that cleaves disulfide bonds of proteins attached to the cell. May therefore cause structural modifications of exofacial proteins. Inside the cell, seems to form/rearrange disulfide bonds of nascent proteins. At high concentrations, functions as a chaperone that inhibits aggregation of misfolded proteins. At low concentrations, facilitates aggregation (anti-chaperone activity). May be involved with other chaperones in the structural modification of the TG precursor in hormone biogenesis. Also acts a structural subunit of various enzymes such as prolyl 4-hydroxylase and microsomal triacylglycerol transfer protein MTTP (By similarity). 
Sequence Annotation
 DOMAIN 20 136 Thioredoxin 1.
 DOMAIN 335 477 Thioredoxin 2.
 MOTIF 506 509 Prevents secretion from ER.
 ACT_SITE 55 55 Nucleophile (By similarity).
 ACT_SITE 58 58 Nucleophile (By similarity).
 ACT_SITE 399 399 Nucleophile (By similarity).
 ACT_SITE 402 402 Nucleophile (By similarity).
 DISULFID 55 58 Redox-active (By similarity).
 DISULFID 399 402 Redox-active (By similarity).  
Keyword
 Cell membrane; Chaperone; Complete proteome; Direct protein sequencing; Disulfide bond; Endoplasmic reticulum; Isomerase; Membrane; Redox-active center; Reference proteome; Repeat; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 509 AA 
Protein Sequence
MLSRALLCLA LAWAARVGAD ALEEEDNVLV LKKSNFAEAL AAHNYLLVEF YAPWCGHCKA 60
LAPEYAKAAA KLKAEGSEIR LAKVDATEES DLAQQYGVRG YPTIKFFKNG DTASPKEYTA 120
GREADDIVNW LKKRTGPAAT TLSDTAAAES LVDSSEVTVI GFFKDAGSDS AKQFLLAAEA 180
VDDIPFGITS NSDVFSKYQL DKDGVVLFKK FDEGRNNFEG EITKEKLLDF IKHNQLPLVI 240
EFTEQTAPKI FGGEIKTHIL LFLPKSVSDY DGKLSNFKKA AEGFKGKILF IFIDSDHTDN 300
QRILEFFGLK KEECPAVRLI TLEEEMTKYK PESDELTAEK ITQFCHHFLE GKIKPHLMSQ 360
ELPEDWDKQP VKVLVGKNFE EVAFDEKKNV FVEFYAPWCG HCKQLAPIWD KLGETYKDHE 420
NIVIAKMDST ANEVEAVKVH SFPTLKFFPA SADRTVIDYN GERTLDGFKK FLESGGQDGA 480
GDNDDLDLEE ALEPDMEEDD DQKAVKDEL 509 
Gene Ontology
 GO:0009986; C:cell surface; IEA:Compara.
 GO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell.
 GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:Compara.
 GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0009055; F:electron carrier activity; IEA:InterPro.
 GO:0004656; F:procollagen-proline 4-dioxygenase activity; IEA:Compara.
 GO:0003756; F:protein disulfide isomerase activity; IMP:RGD.
 GO:0015035; F:protein disulfide oxidoreductase activity; IEA:InterPro.
 GO:0045454; P:cell redox homeostasis; IEA:InterPro.
 GO:0006662; P:glycerol ether metabolic process; IEA:InterPro.
 GO:0018401; P:peptidyl-proline hydroxylation to 4-hydroxy-L-proline; IEA:Compara. 
Interpro
 IPR005788; Disulphide_isomerase.
 IPR005792; Prot_disulphide_isomerase.
 IPR005746; Thioredoxin.
 IPR012336; Thioredoxin-like_fold.
 IPR017937; Thioredoxin_CS.
 IPR013766; Thioredoxin_domain. 
Pfam
 PF00085; Thioredoxin 
SMART
  
PROSITE
 PS00014; ER_TARGET
 PS00194; THIOREDOXIN_1
 PS51352; THIOREDOXIN_2 
PRINTS
 PR00421; THIOREDOXIN.