CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015799
UniProt Accession
Genbank Protein ID
  
Genbank Nucleotide ID
  
Protein Name
 Histone H2B 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Tetrahymena pyriformis 
NCBI Taxa ID
 5908 
Lysine Modification
Position
Peptide
Type
References
5***MAPKKAPAAAEKacetylation[1, 2]
Reference
 [1] Histone acetylation in replication and transcription: turnover at specific acetylation sites in histone H4 from Physarum polycephalum.
 Pesis KH, Matthews HR.
 Arch Biochem Biophys. 1986 Dec;251(2):665-73. [PMID: 3800393]
 [2] Tetrahymena histone H2B. Complete amino acid sequence.
 Nomoto M, Hayashi H, Iwai K.
 J Biochem. 1982 Mar;91(3):897-904. [PMID: 6804458
Functional Description
 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. 
Sequence Annotation
 MOD_RES 2 2 N,N,N-trimethylalanine.
 MOD_RES 5 5 N6-acetyllysine.
 MOD_RES 41 41 N6-acetyllysine (By similarity).
 CROSSLNK 115 115 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Acetylation; Chromosome; Direct protein sequencing; DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 121 AA 
Protein Sequence
MAPKKAPAAA EKKVKKAPTT EKKNKKKRSE TFAIYIFKVL KQVHPDVGIS KKAMNIMNSF 60
INDSFERIAL ESSKLVRFNK RRTLSSREVQ TAVKLLLPGE LARHAISEGT KAVTKFSSST 120
N 121 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR000558; Histone_H2B. 
Pfam
 PF00125; Histone 
SMART
 SM00427; H2B 
PROSITE
 PS00357; HISTONE_H2B 
PRINTS
 PR00621; HISTONEH2B.