CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002765
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 CD48 antigen 
Protein Synonyms/Alias
 B-lymphocyte activation marker BLAST-1; BCM1 surface antigen; Leukocyte antigen MEM-102; SLAM family member 2; SLAMF2; Signaling lymphocytic activation molecule 2; TCT.1; CD48 
Gene Name
 CD48 
Gene Synonyms/Alias
 BCM1; BLAST1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
124NEQEWKIKLQVLDPVubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Ligand for CD2. Might facilitate interaction between activated lymphocytes. Probably involved in regulating T-cell activation. 
Sequence Annotation
 DOMAIN 29 127 Ig-like C2-type 1.
 DOMAIN 132 212 Ig-like C2-type 2.
 LIPID 220 220 GPI-anchor amidated serine.
 CARBOHYD 40 40 N-linked (GlcNAc...) (Potential).
 CARBOHYD 44 44 N-linked (GlcNAc...) (Potential).
 CARBOHYD 104 104 N-linked (GlcNAc...).
 CARBOHYD 162 162 N-linked (GlcNAc...) (Potential).
 CARBOHYD 178 178 N-linked (GlcNAc...); atypical.
 CARBOHYD 189 189 N-linked (GlcNAc...).
 DISULFID 154 196 Potential.  
Keyword
 3D-structure; Cell membrane; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; GPI-anchor; Immunoglobulin domain; Lipoprotein; Membrane; Polymorphism; Reference proteome; Repeat; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 243 AA 
Protein Sequence
MCSRGWDSCL ALELLLLPLS LLVTSIQGHL VHMTVVSGSN VTLNISESLP ENYKQLTWFY 60
TFDQKIVEWD SRKSKYFESK FKGRVRLDPQ SGALYISKVQ KEDNSTYIMR VLKKTGNEQE 120
WKIKLQVLDP VPKPVIKIEK IEDMDDNCYL KLSCVIPGES VNYTWYGDKR PFPKELQNSV 180
LETTLMPHNY SRCYTCQVSN SVSSKNGTVC LSPPCTLARS FGVEWIASWL VVTVPTILGL 240
LLT 243 
Gene Ontology
 GO:0046658; C:anchored to plasma membrane; IEA:Compara.
 GO:0009897; C:external side of plasma membrane; IEA:Compara.
 GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
 GO:0045121; C:membrane raft; IDA:UniProtKB.
 GO:0043234; C:protein complex; IEA:Compara.
 GO:0003823; F:antigen binding; IEA:Compara.
 GO:0004872; F:receptor activity; IEA:InterPro.
 GO:0007596; P:blood coagulation; TAS:Reactome.
 GO:0006952; P:defense response; TAS:ProtInc.
 GO:0050900; P:leukocyte migration; TAS:Reactome.
 GO:0045576; P:mast cell activation; IEA:Compara.
 GO:0007165; P:signal transduction; IEA:Compara.
 GO:0042110; P:T cell activation; IEA:Compara. 
Interpro
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR003599; Ig_sub.
 IPR013106; Ig_V-set.
 IPR015631; SLAM_fam_rcpts. 
Pfam
 PF07686; V-set 
SMART
 SM00409; IG 
PROSITE
 PS50835; IG_LIKE 
PRINTS