CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003646
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 60S ribosomal protein L11-A 
Protein Synonyms/Alias
 L16; RP39; YL22 
Gene Name
 RPL11A 
Gene Synonyms/Alias
 RP39A; RPL16A; YPR102C; P8283.14 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
35DRLTRASKVLEQLSGacetylation[1]
35DRLTRASKVLEQLSGubiquitination[2]
49GQTPVQSKARYTVRTacetylation[1]
49GQTPVQSKARYTVRTubiquitination[2]
64FGIRRNEKIAVHVTVacetylation[1]
75HVTVRGPKAEEILERacetylation[1]
75HVTVRGPKAEEILERubiquitination[2]
87LERGLKVKEYQLRDRubiquitination[2]
156GNSHKTTKEDTVSWFacetylation[1]
164EDTVSWFKQKYDADVacetylation[1]
164EDTVSWFKQKYDADVubiquitination[2]
166TVSWFKQKYDADVLDacetylation[1]
166TVSWFKQKYDADVLDubiquitination[2]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Binds to 5S ribosomal RNA. 
Sequence Annotation
 MOD_RES 2 2 N-acetylserine.  
Keyword
 3D-structure; Acetylation; Complete proteome; Cytoplasm; Direct protein sequencing; Nucleus; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 174 AA 
Protein Sequence
MSAKAQNPMR DLKIEKLVLN ISVGESGDRL TRASKVLEQL SGQTPVQSKA RYTVRTFGIR 60
RNEKIAVHVT VRGPKAEEIL ERGLKVKEYQ LRDRNFSATG NFGFGIDEHI DLGIKYDPSI 120
GIFGMDFYVV MNRPGARVTR RKRCKGTVGN SHKTTKEDTV SWFKQKYDAD VLDK 174 
Gene Ontology
 GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
 GO:0003735; F:structural constituent of ribosome; TAS:SGD.
 GO:0002181; P:cytoplasmic translation; TAS:SGD.
 GO:0000027; P:ribosomal large subunit assembly; IMP:SGD. 
Interpro
 IPR002132; Ribosomal_L5.
 IPR020929; Ribosomal_L5_CS.
 IPR022803; Ribosomal_L5_domain. 
Pfam
 PF00281; Ribosomal_L5
 PF00673; Ribosomal_L5_C 
SMART
  
PROSITE
 PS00358; RIBOSOMAL_L5 
PRINTS